C. lupus familiaris Gene: TDRD1 - ENSCAFG00000011266 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000011266
NameTDRD1
Descriptiontudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
OrganismCanis lupus familiaris (dog)
Synonym(s)ct41.1
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
3.82e3
  • 3.82e3
82.91
  • 82.91
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.16e3
  • 9.16e3
  • 1.73e4
59.05
  • 59.05
  • 22.62
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
  • 1.21e4
54.65
  • 54.65
  • 45.78
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
52.94
  • 52.94
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
  • 1.22e4
48.37
  • 48.37
  • 45.61
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.28e4
  • 1.28e4
  • 1.66e4
42.84
  • 42.84
  • 25.98
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.42
  • 40.42
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 1.52e4
36.91
  • 36.91
  • 32.09
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
  • 1.52e4
  • 1.59e4
35.75
  • 35.75
  • 31.83
  • 28.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.18
  • 34.18
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.83
  • 32.83
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
32.15
  • 32.15
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
31.82
  • 31.82
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.27
  • 31.27
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.58
  • 30.58
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.82e4
30.00
  • 30.00
  • 18.51
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
29.30
  • 29.30
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
  • 1.74e4
29.19
  • 29.19
  • 21.97
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
28.42
  • 28.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
28.16
  • 28.16
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
28.13
  • 28.13
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
27.29
  • 27.29
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.68e4
  • 1.68e4
24.98
  • 24.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
24.72
  • 24.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
  • 1.76e4
23.53
  • 23.53
  • 21.36
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.76e4
  • 1.76e4
21.43
  • 21.43
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
20.52
  • 20.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000011266.

Cross-references

EnsemblENSCAFG00000011266 (TDRD1)
HGNCHGNC:11712 (TDRD1)
EMBLAAEX03015539
Uniprot/SPTREMBLF1Q1V6, F1Q1V6_CANLF

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