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C. lupus familiaris Gene: SPTA1 - ENSCAFG00000011638 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000011638
NameSPTA1
Descriptionspectrin, alpha, erythrocytic 1 [Source:HGNC Symbol;Acc:HGNC:11272]
OrganismCanis lupus familiaris (dog)
Synonym(s)el2
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
  • 7.21e3
  • 1.40e4
94.42
  • 94.42
  • 67.75
  • 37.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
3.91e3
  • 3.91e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.89e3
  • 6.89e3
  • 1.33e4
  • 1.41e4
  • 1.55e4
  • 1.55e4
69.18
  • 69.18
  • 40.73
  • 36.95
  • 30.70
  • 30.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
6.95e3
  • 6.95e3
  • 1.73e4
68.93
  • 68.93
  • 22.49
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
7.37e3
  • 7.37e3
67.03
  • 67.03
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
44.91
  • 44.91
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.83e4
44.78
  • 44.78
  • 18.29
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
38.00
  • 38.00
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
1.45e4
  • 1.45e4
35.24
  • 35.24
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
29.28
  • 29.28
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 2.07e4
28.27
  • 28.27
  • 7.61
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.61e4
  • 1.61e4
28.19
  • 28.19
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
25.28
  • 25.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
22.12
  • 22.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSCAFG00000011638.

Cross-references

EnsemblENSCAFG00000011638 (SPTA1)
HGNCHGNC:11272 (SPTA1)
EMBLAAEX03018503
Uniprot/SPTREMBLE2R1P6, E2R1P6_CANLF

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