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C. lupus familiaris Gene: SLC18A2 - ENSCAFG00000011950 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000011950
NameSLC18A2
Descriptionsolute carrier family 18 (vesicular monoamine transporter), member 2 [Source:HGNC Symbol;Acc:HGNC:10935]
OrganismCanis lupus familiaris (dog)
Synonym(s)svat, svmt, vmat2
Orthologs(s)27 orthologs
Paralog(s)28 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
4.91e3
  • 4.91e3
  • 6.78e3
  • 9.53e3
78.04
  • 78.04
  • 69.70
  • 57.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.58e3
  • 5.58e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.65e3
  • 6.65e3
  • 7.02e3
70.26
  • 70.26
  • 68.60
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
6.66e3
  • 6.66e3
70.20
  • 70.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
70.18
  • 70.18
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
65.41
  • 65.41
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
  • 1.18e4
53.77
  • 53.77
  • 47.31
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.52e4
51.03
  • 51.03
  • 32.02
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.13e4
  • 1.29e4
  • 1.41e4
  • 1.55e4
50.91
  • 50.91
  • 49.55
  • 42.23
  • 36.76
  • 30.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.24e4
46.38
  • 46.38
  • 44.52
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.33e4
44.44
  • 44.44
  • 40.43
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.27e4
  • 1.27e4
43.38
  • 43.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
  • 1.38e4
41.87
  • 41.87
  • 38.43
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.52e4
41.68
  • 41.68
  • 31.87
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
  • 1.40e4
  • 1.47e4
41.27
  • 41.27
  • 37.39
  • 34.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.18
  • 40.18
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
40.10
  • 40.10
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
39.62
  • 39.62
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
39.61
  • 39.61
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
39.49
  • 39.49
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.36e4
  • 1.36e4
  • 1.39e4
  • 1.42e4
39.22
  • 39.22
  • 37.66
  • 36.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.36e4
  • 1.36e4
39.08
  • 39.08
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
38.65
  • 38.65
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
  • 1.45e4
38.34
  • 38.34
  • 35.21
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.55e4
37.38
  • 37.38
  • 30.85
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
  • 1.50e4
35.96
  • 35.96
  • 32.86
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.47
  • 34.47
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.88
  • 33.88
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
  • 1.53e4
33.63
  • 33.63
  • 31.72
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.60
  • 33.60
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
32.99
  • 32.99
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
32.02
  • 32.02
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
31.81
  • 31.81
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
31.35
  • 31.35
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
31.17
  • 31.17
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.80
  • 30.80
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.57e4
  • 1.57e4
29.82
  • 29.82
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
29.09
  • 29.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
29.05
  • 29.05
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
28.28
  • 28.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species27 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000011950.

Paralogs (same species)

Cross-references

EnsemblENSCAFG00000011950 (SLC18A2)
HGNCHGNC:10935 (SLC18A2)
EMBLAAEX03015567
Uniprot/SPTREMBLF1PD81, F1PD81_CANLF

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