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C. lupus familiaris Gene: - ENSCAFG00000012222 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012222
Name-
DescriptionElongation factor 1-alpha [Source:UniProtKB/TrEMBL;Acc:E2QW85]
OrganismCanis lupus familiaris (dog)
Orthologs(s)41 orthologs
Paralog(s)45 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
4.27e3
  • 4.27e3
  • 8.08e3
  • 9.44e3
  • 1.01e4
  • 1.09e4
80.91
  • 80.91
  • 63.87
  • 57.78
  • 54.68
  • 51.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.72e3
  • 4.72e3
  • 8.10e3
78.88
  • 78.88
  • 63.77
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.37e3
  • 5.37e3
76.01
  • 76.01
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
6.69e3
  • 6.69e3
70.09
  • 70.09
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.97e3
  • 6.97e3
68.83
  • 68.83
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
6.98e3
  • 6.98e3
68.78
  • 68.78
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.07e3
  • 7.07e3
  • 7.76e3
  • 9.74e3
68.39
  • 68.39
  • 65.29
  • 56.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
7.19e3
  • 7.19e3
  • 9.68e3
  • 9.99e3
67.85
  • 67.85
  • 56.72
  • 55.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
7.33e3
  • 7.33e3
67.21
  • 67.21
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.38e3
  • 7.38e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
7.66e3
  • 7.66e3
65.74
  • 65.74
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.69e3
  • 7.69e3
65.62
  • 65.62
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.88e3
  • 7.88e3
  • 8.21e3
64.77
  • 64.77
  • 63.30
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
8.03e3
  • 8.03e3
  • 9.23e3
64.08
  • 64.08
  • 58.71
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
8.43e3
  • 8.43e3
62.31
  • 62.31
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.71e3
  • 8.71e3
  • 1.11e4
  • 1.17e4
61.05
  • 61.05
  • 50.18
  • 47.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.72e3
  • 8.72e3
  • 8.76e3
61.01
  • 61.01
  • 60.82
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
8.76e3
  • 8.76e3
  • 1.05e4
60.83
  • 60.83
  • 53.23
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
9.16e3
  • 9.16e3
59.05
  • 59.05
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.21e3
  • 9.21e3
  • 1.08e4
58.84
  • 58.84
  • 51.76
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.29e3
  • 9.29e3
  • 1.07e4
58.48
  • 58.48
  • 52.09
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
9.84e3
  • 9.84e3
56.01
  • 56.01
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
9.92e3
  • 9.92e3
55.65
  • 55.65
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.27
  • 55.27
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
54.89
  • 54.89
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.80
  • 54.80
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
53.17
  • 53.17
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.07e4
52.99
  • 52.99
  • 52.20
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.61
  • 52.61
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.65
  • 51.65
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.20e4
51.11
  • 51.11
  • 46.18
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.72
  • 50.72
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
  • 1.39e4
50.15
  • 50.15
  • 37.91
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.12e4
  • 1.12e4
49.79
  • 49.79
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
48.83
  • 48.83
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
  • 1.34e4
48.75
  • 48.75
  • 40.26
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
47.58
  • 47.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.90
  • 46.90
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.43
  • 46.43
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
45.34
  • 45.34
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.34
  • 44.34
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.47
  • 43.47
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.40e4
42.07
  • 42.07
  • 37.28
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.18
  • 41.18
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
39.38
  • 39.38
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.29
  • 39.29
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
38.97
  • 38.97
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.13
  • 38.13
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.41
  • 37.41
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
33.54
  • 33.54
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
31.61
  • 31.61
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
  • 1.69e4
27.48
  • 27.48
  • 24.56
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species6 genesCompare expression
Boreoeutheria12 species20 genesCompare expression
Theria13 species21 genesCompare expression
Mammalia14 species22 genesCompare expression
Amniota16 species24 genesCompare expression
Tetrapoda17 species25 genesCompare expression
Euteleostomi18 species27 genesCompare expression
Bilateria25 species41 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012222.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Canidae4 genesCompare expression
Vertebrata12 genesCompare expression
Chordata14 genesCompare expression
Deuterostomia20 genesCompare expression
Bilateria24 genesCompare expression
Opisthokonta35 genesCompare expression
Eukaryota45 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000012222.

Cross-references

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