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C. lupus familiaris Gene: - ENSCAFG00000012234 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012234
Name-
Description40S ribosomal protein S27 [Source:UniProtKB/TrEMBL;Acc:J9NTI9]
OrganismCanis lupus familiaris (dog)
Orthologs(s)42 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
26.0
  • 26.0
  • 94.9
99.89
  • 99.89
  • 99.58
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
26.0
  • 26.0
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
34.0
  • 34.0
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
35.0
  • 35.0
  • 80.7
  • 90.0
99.85
  • 99.85
  • 99.64
  • 99.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
62.0
  • 62.0
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
65.0
  • 65.0
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
67.0
  • 67.0
99.70
  • 99.70
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
68.0
  • 68.0
  • 204
99.70
  • 99.70
  • 99.09
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
70.6
  • 70.6
  • 269
99.69
  • 99.69
  • 98.80
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
72.0
  • 72.0
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
73.0
  • 73.0
  • 1.89e3
99.68
  • 99.68
  • 91.54
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
74.0
  • 74.0
  • 145
99.67
  • 99.67
  • 99.36
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
75.0
  • 75.0
  • 120
  • 187
99.67
  • 99.67
  • 99.47
  • 99.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
76.0
  • 76.0
  • 102
  • 156
99.66
  • 99.66
  • 99.55
  • 99.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
77.0
  • 77.0
  • 224
99.66
  • 99.66
  • 99.00
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
78.0
  • 78.0
  • 1.61e3
99.66
  • 99.66
  • 92.79
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
83.0
  • 83.0
  • 154
99.63
  • 99.63
  • 99.32
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
83.0
  • 83.0
  • 101
  • 142
  • 174
  • 816
99.63
  • 99.63
  • 99.55
  • 99.37
  • 99.22
  • 96.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
88.0
  • 88.0
  • 343
99.61
  • 99.61
  • 98.47
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
107
  • 107
99.53
  • 99.53
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
115
  • 115
  • 141
99.49
  • 99.49
  • 99.38
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
116
  • 116
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
118
  • 118
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
121
  • 121
99.46
  • 99.46
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
122
  • 122
  • 218
99.46
  • 99.46
  • 99.03
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
128
  • 128
  • 142
99.43
  • 99.43
  • 99.37
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
132
  • 132
  • 431
99.41
  • 99.41
  • 98.08
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
137
  • 137
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
143
  • 143
99.37
  • 99.37
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
151
  • 151
99.33
  • 99.33
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
151
  • 151
  • 193
99.33
  • 99.33
  • 99.14
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
158
  • 158
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
159
  • 159
99.29
  • 99.29
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
184
  • 184
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
195
  • 195
99.13
  • 99.13
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
199
  • 199
99.11
  • 99.11
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
204
  • 204
  • 229
99.09
  • 99.09
  • 98.98
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
220
  • 220
99.02
  • 99.02
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
226
  • 226
98.99
  • 98.99
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
234
  • 234
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
235
  • 235
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
238
  • 238
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
266
  • 266
  • 584
98.81
  • 98.81
  • 97.39
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
272
  • 272
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
290
  • 290
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
305
  • 305
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
316
  • 316
98.59
  • 98.59
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
338
  • 338
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
404
  • 404
98.20
  • 98.20
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
1.02e3
  • 1.02e3
95.43
  • 95.43
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.46e3
  • 1.46e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e3
  • 1.50e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.72e3
  • 1.72e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
2.91e3
  • 2.91e3
87.00
  • 87.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species7 genesCompare expression
Boreoeutheria13 species29 genesCompare expression
Theria14 species30 genesCompare expression
Amniota15 species31 genesCompare expression
Tetrapoda16 species32 genesCompare expression
Euteleostomi17 species35 genesCompare expression
Bilateria24 species42 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012234.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Canidae2 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000012234.

Cross-references

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