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C. lupus familiaris Gene: SPTBN2 - ENSCAFG00000012306 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012306
NameSPTBN2
Descriptionspectrin, beta, non-erythrocytic 2 [Source:HGNC Symbol;Acc:HGNC:11276]
OrganismCanis lupus familiaris (dog)
Synonym(s)sca5
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000004nose
  • UBERON:0000104life cycle
1.65e3
  • 1.65e3
92.61
  • 92.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.91e3
  • 1.91e3
  • 1.10e4
91.44
  • 91.44
  • 50.69
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.29e3
  • 2.29e3
  • 5.61e3
89.77
  • 89.77
  • 74.90
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
2.41e3
  • 2.41e3
89.22
  • 89.22
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.57e3
  • 2.57e3
  • 4.29e3
88.51
  • 88.51
  • 80.81
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.96e3
  • 2.96e3
  • 8.42e3
  • 1.22e4
86.76
  • 86.76
  • 62.34
  • 45.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.43e3
  • 3.43e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
3.55e3
  • 3.55e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
3.60e3
  • 3.60e3
83.92
  • 83.92
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.71e3
  • 3.71e3
83.43
  • 83.43
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.73e3
  • 3.73e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.12e3
  • 4.12e3
81.56
  • 81.56
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.53e3
  • 5.53e3
75.30
  • 75.30
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
5.60e3
  • 5.60e3
74.98
  • 74.98
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
5.72e3
  • 5.72e3
74.45
  • 74.45
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.94e3
  • 5.94e3
  • 1.30e4
73.44
  • 73.44
  • 41.73
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
6.23e3
  • 6.23e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.33e3
  • 6.33e3
  • 7.56e3
71.68
  • 71.68
  • 66.20
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.64e3
  • 6.64e3
70.31
  • 70.31
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
6.67e3
  • 6.67e3
70.16
  • 70.16
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
7.27e3
  • 7.27e3
67.49
  • 67.49
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.20e3
  • 8.20e3
63.33
  • 63.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
8.93e3
  • 8.93e3
60.06
  • 60.06
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.35e3
  • 9.35e3
58.18
  • 58.18
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.86e3
  • 9.86e3
  • 1.05e4
55.90
  • 55.90
  • 53.08
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
9.93e3
  • 9.93e3
  • 1.48e4
  • 1.51e4
  • 1.51e4
  • 1.56e4
55.61
  • 55.61
  • 33.86
  • 32.57
  • 32.28
  • 30.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
  • 1.52e4
54.68
  • 54.68
  • 32.05
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.57
  • 53.57
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.35
  • 53.35
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
52.69
  • 52.69
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.08e4
  • 1.08e4
  • 1.29e4
51.79
  • 51.79
  • 42.35
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
50.44
  • 50.44
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
  • 1.17e4
50.19
  • 50.19
  • 47.48
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.13e4
  • 1.13e4
49.35
  • 49.35
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.97
  • 48.97
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.85
  • 45.85
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.32e4
41.92
  • 41.92
  • 41.01
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
  • 1.36e4
  • 1.42e4
41.40
  • 41.40
  • 39.40
  • 36.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.26
  • 41.26
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
  • 1.53e4
40.04
  • 40.04
  • 31.57
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
39.94
  • 39.94
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.51
  • 39.51
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
33.89
  • 33.89
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.23
  • 33.23
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.58e4
31.99
  • 31.99
  • 29.54
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
28.61
  • 28.61
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
27.97
  • 27.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012306.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000012306.

Cross-references

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