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C. lupus familiaris Gene: H2AFX - ENSCAFG00000012332 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012332
NameH2AFX
DescriptionH2A histone family member X [Source:HGNC Symbol;Acc:HGNC:4739]
OrganismCanis lupus familiaris (dog)
Synonym(s)h2ax
Orthologs(s)222 orthologs
Paralog(s)17 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
603
  • 603
97.31
  • 97.31
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
752
  • 752
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
887
  • 887
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.15e3
  • 1.15e3
  • 5.36e3
94.85
  • 94.85
  • 76.03
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
  • 3.16e3
  • 8.48e3
94.43
  • 94.43
  • 85.88
  • 62.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
94.07
  • 94.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
93.04
  • 93.04
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.00e3
  • 2.00e3
  • 5.99e3
  • 1.33e4
91.06
  • 91.06
  • 73.21
  • 40.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.22e3
  • 2.22e3
  • 1.12e4
90.09
  • 90.09
  • 49.97
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
2.23e3
  • 2.23e3
90.04
  • 90.04
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
2.27e3
  • 2.27e3
  • 4.10e3
  • 1.16e4
89.83
  • 89.83
  • 81.68
  • 47.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
89.57
  • 89.57
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.36e3
  • 2.36e3
89.44
  • 89.44
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
2.48e3
  • 2.48e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
2.60e3
  • 2.60e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
2.79e3
  • 2.79e3
  • 3.44e3
  • 5.80e3
  • 8.45e3
  • 8.49e3
87.54
  • 87.54
  • 84.63
  • 74.05
  • 62.23
  • 62.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
2.83e3
  • 2.83e3
87.34
  • 87.34
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
3.08e3
  • 3.08e3
86.23
  • 86.23
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
3.09e3
  • 3.09e3
  • 9.57e3
86.21
  • 86.21
  • 57.22
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.14e3
  • 3.14e3
  • 9.04e3
85.95
  • 85.95
  • 59.59
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.04e3
  • 4.04e3
  • 1.09e4
81.92
  • 81.92
  • 51.10
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
4.08e3
  • 4.08e3
  • 9.20e3
81.75
  • 81.75
  • 58.87
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.41e3
  • 4.41e3
80.29
  • 80.29
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.64e3
  • 4.64e3
79.25
  • 79.25
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.85e3
  • 4.85e3
78.33
  • 78.33
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
5.13e3
  • 5.13e3
77.05
  • 77.05
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.22e3
  • 5.22e3
  • 9.31e3
76.66
  • 76.66
  • 58.36
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.26e3
  • 5.26e3
  • 9.99e3
76.50
  • 76.50
  • 55.34
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
5.55e3
  • 5.55e3
75.19
  • 75.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.61e3
  • 5.61e3
  • 8.15e3
74.92
  • 74.92
  • 63.57
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.63e3
  • 5.63e3
  • 8.59e3
74.82
  • 74.82
  • 61.61
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.73e3
  • 5.73e3
74.38
  • 74.38
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
6.04e3
  • 6.04e3
72.97
  • 72.97
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
6.13e3
  • 6.13e3
72.58
  • 72.58
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
6.37e3
  • 6.37e3
71.51
  • 71.51
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
6.40e3
  • 6.40e3
71.37
  • 71.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.72e3
  • 6.72e3
  • 9.70e3
69.95
  • 69.95
  • 56.64
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
7.02e3
  • 7.02e3
68.59
  • 68.59
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
7.12e3
  • 7.12e3
68.18
  • 68.18
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
7.45e3
  • 7.45e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
7.99e3
  • 7.99e3
64.26
  • 64.26
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.20e3
  • 8.20e3
  • 8.80e3
63.36
  • 63.36
  • 60.67
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.02e3
  • 9.02e3
  • 9.29e3
59.69
  • 59.69
  • 58.47
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
9.44e3
  • 9.44e3
57.81
  • 57.81
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
9.87e3
  • 9.87e3
55.87
  • 55.87
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.46e4
55.29
  • 55.29
  • 34.91
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
54.09
  • 54.09
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.44
  • 53.44
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
50.39
  • 50.39
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.61
  • 48.61
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
46.00
  • 46.00
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
45.57
  • 45.57
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.57
  • 44.57
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.32e4
  • 1.32e4
41.18
  • 41.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species36 genesCompare expression
Boreoeutheria11 species128 genesCompare expression
Theria12 species135 genesCompare expression
Mammalia13 species163 genesCompare expression
Amniota15 species173 genesCompare expression
Tetrapoda16 species190 genesCompare expression
Euteleostomi17 species222 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012332.

Paralogs (same species)

Cross-references

EnsemblENSCAFG00000012332 (H2AFX)
HGNCHGNC:4739 (H2AFX)
EMBLAAEX03003441
Uniprot/SPTREMBLE2RNB0, E2RNB0_CANLF

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