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C. lupus familiaris Gene: PSMD2 - ENSCAFG00000012608 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012608
NamePSMD2
Descriptionproteasome 26S subunit, non-ATPase 2 [Source:HGNC Symbol;Acc:HGNC:9559]
OrganismCanis lupus familiaris (dog)
Synonym(s)mgc14274, p97, rpn1, s2, trap2
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
199
  • 199
  • 1.01e3
99.11
  • 99.11
  • 95.47
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
215
  • 215
  • 1.75e3
99.04
  • 99.04
  • 92.18
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
720
  • 720
96.78
  • 96.78
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
916
  • 916
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
925
  • 925
95.87
  • 95.87
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
954
  • 954
95.74
  • 95.74
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.01e3
  • 1.01e3
  • 1.65e3
95.51
  • 95.51
  • 92.64
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.11e3
  • 1.11e3
  • 1.15e3
95.04
  • 95.04
  • 94.88
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.13e3
  • 1.13e3
94.96
  • 94.96
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.14e3
  • 1.14e3
94.89
  • 94.89
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.16e3
  • 1.16e3
94.83
  • 94.83
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.17e3
  • 1.17e3
  • 1.29e3
94.78
  • 94.78
  • 94.24
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.21e3
  • 1.21e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.22e3
  • 1.22e3
94.56
  • 94.56
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.24e3
  • 1.24e3
94.46
  • 94.46
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.26e3
  • 1.26e3
  • 2.38e3
  • 2.56e3
94.39
  • 94.39
  • 89.35
  • 88.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.28e3
  • 1.28e3
  • 1.30e3
94.30
  • 94.30
  • 94.20
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.29e3
  • 1.29e3
  • 1.99e3
94.26
  • 94.26
  • 91.09
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.29e3
  • 1.29e3
  • 1.48e3
94.22
  • 94.22
  • 93.38
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.30e3
  • 1.30e3
  • 1.37e3
94.17
  • 94.17
  • 93.89
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.33e3
  • 1.33e3
94.08
  • 94.08
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
94.05
  • 94.05
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.34e3
  • 1.34e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.36e3
  • 1.36e3
  • 1.63e3
  • 1.78e3
  • 1.82e3
  • 2.50e3
93.94
  • 93.94
  • 92.70
  • 92.05
  • 91.89
  • 88.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.39e3
  • 1.39e3
  • 1.46e3
93.79
  • 93.79
  • 93.48
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.40e3
  • 1.40e3
93.75
  • 93.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.46e3
  • 1.46e3
  • 1.49e3
93.47
  • 93.47
  • 93.36
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
93.43
  • 93.43
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.48e3
  • 1.48e3
93.39
  • 93.39
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.49e3
  • 1.49e3
93.36
  • 93.36
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.49e3
  • 1.49e3
93.36
  • 93.36
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.52e3
  • 1.52e3
93.19
  • 93.19
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.58e3
  • 1.58e3
  • 1.83e3
92.92
  • 92.92
  • 91.84
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.65e3
  • 1.65e3
92.64
  • 92.64
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.67e3
  • 1.67e3
92.52
  • 92.52
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.67e3
  • 1.67e3
92.52
  • 92.52
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.70e3
  • 1.70e3
  • 2.39e3
92.41
  • 92.41
  • 89.33
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.74e3
  • 1.74e3
  • 1.74e3
92.25
  • 92.25
  • 92.24
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.78e3
  • 1.78e3
  • 2.03e3
  • 2.55e3
92.06
  • 92.06
  • 90.93
  • 88.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.80e3
  • 1.80e3
91.94
  • 91.94
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.81e3
  • 1.81e3
  • 1.90e3
  • 2.41e3
91.91
  • 91.91
  • 91.52
  • 89.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.83e3
  • 1.83e3
91.82
  • 91.82
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.85e3
  • 1.85e3
91.72
  • 91.72
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.90e3
  • 1.90e3
91.49
  • 91.49
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.91e3
  • 1.91e3
91.48
  • 91.48
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.92e3
  • 1.92e3
91.40
  • 91.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.02e3
  • 2.02e3
  • 2.41e3
90.98
  • 90.98
  • 89.22
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
2.14e3
  • 2.14e3
90.45
  • 90.45
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.21e3
  • 2.21e3
  • 3.18e3
90.10
  • 90.10
  • 85.77
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
2.30e3
  • 2.30e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
2.34e3
  • 2.34e3
89.54
  • 89.54
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
2.58e3
  • 2.58e3
88.46
  • 88.46
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
2.82e3
  • 2.82e3
87.40
  • 87.40
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.90e3
  • 2.90e3
87.05
  • 87.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012608.

Cross-references

EnsemblENSCAFG00000012608 (PSMD2)
HGNCHGNC:9559 (PSMD2)
EMBLAAEX03017275
Uniprot/SPTREMBLE2RCP9, E2RCP9_CANLF

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