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C. lupus familiaris Gene: RBBP7 - ENSCAFG00000012688 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012688
NameRBBP7
Descriptionretinoblastoma binding protein 7 [Source:HGNC Symbol;Acc:HGNC:9890]
OrganismCanis lupus familiaris (dog)
Synonym(s)rbap46
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
620
  • 620
97.23
  • 97.23
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
631
  • 631
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
783
  • 783
  • 1.34e3
96.50
  • 96.50
  • 94.02
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
800
  • 800
96.43
  • 96.43
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
801
  • 801
  • 1.51e3
  • 1.57e3
96.42
  • 96.42
  • 93.27
  • 92.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
863
  • 863
  • 1.22e3
96.15
  • 96.15
  • 94.55
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
876
  • 876
96.09
  • 96.09
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
901
  • 901
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
919
  • 919
  • 2.89e3
95.89
  • 95.89
  • 87.10
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
948
  • 948
  • 1.29e3
95.76
  • 95.76
  • 94.24
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
979
  • 979
  • 1.74e3
95.63
  • 95.63
  • 92.23
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
980
  • 980
95.62
  • 95.62
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
986
  • 986
95.60
  • 95.60
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.14e3
  • 1.14e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.14e3
  • 1.14e3
  • 1.36e3
94.92
  • 94.92
  • 93.94
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.14e3
  • 1.14e3
  • 2.43e3
94.91
  • 94.91
  • 89.13
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.15e3
  • 1.15e3
94.87
  • 94.87
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.21e3
  • 1.21e3
94.59
  • 94.59
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
  • 1.32e3
94.53
  • 94.53
  • 94.11
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
  • 1.23e3
94.51
  • 94.51
  • 94.48
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.24e3
  • 1.24e3
  • 1.38e3
  • 1.47e3
94.47
  • 94.47
  • 93.86
  • 93.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.28e3
  • 1.28e3
  • 1.40e3
94.30
  • 94.30
  • 93.77
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.38e3
  • 1.38e3
93.83
  • 93.83
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
93.77
  • 93.77
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.42e3
  • 1.42e3
93.65
  • 93.65
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.43e3
  • 1.43e3
  • 1.92e3
  • 2.21e3
93.62
  • 93.62
  • 91.42
  • 90.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.44e3
  • 1.44e3
  • 2.13e3
93.56
  • 93.56
  • 90.48
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.52e3
  • 1.52e3
  • 1.54e3
93.22
  • 93.22
  • 93.14
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.52e3
  • 1.52e3
  • 2.23e3
93.21
  • 93.21
  • 90.04
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.63e3
  • 1.63e3
92.72
  • 92.72
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.67e3
  • 1.67e3
92.56
  • 92.56
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
92.45
  • 92.45
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
92.43
  • 92.43
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.72e3
  • 1.72e3
92.32
  • 92.32
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.72e3
  • 1.72e3
92.32
  • 92.32
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.72e3
  • 1.72e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.72e3
  • 1.72e3
  • 1.92e3
92.30
  • 92.30
  • 91.40
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.73e3
  • 1.73e3
92.26
  • 92.26
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.84e3
  • 1.84e3
  • 2.31e3
91.78
  • 91.78
  • 89.68
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.94e3
  • 1.94e3
  • 2.83e3
  • 3.05e3
  • 3.45e3
  • 3.62e3
91.35
  • 91.35
  • 87.35
  • 86.35
  • 84.57
  • 83.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.97e3
  • 1.97e3
91.17
  • 91.17
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.98e3
  • 1.98e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
2.05e3
  • 2.05e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
2.15e3
  • 2.15e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
2.17e3
  • 2.17e3
90.31
  • 90.31
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.26e3
  • 2.26e3
89.90
  • 89.90
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
2.35e3
  • 2.35e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
2.37e3
  • 2.37e3
89.40
  • 89.40
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
2.45e3
  • 2.45e3
89.07
  • 89.07
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.55e3
  • 2.55e3
88.61
  • 88.61
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
2.55e3
  • 2.55e3
88.58
  • 88.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
5.09e3
  • 5.09e3
77.23
  • 77.23
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
6.96e3
  • 6.96e3
68.89
  • 68.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012688.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000012688.

Cross-references

EnsemblENSCAFG00000012688 (RBBP7)
HGNCHGNC:9890 (RBBP7)
EMBLAAEX03026166
Uniprot/SPTREMBLE2RM49, E2RM49_CANLF, E2RM67, E2RM67_CANLF

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