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C. lupus familiaris Gene: HMX3 - ENSCAFG00000012698 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012698
NameHMX3
DescriptionH6 family homeobox 3 [Source:HGNC Symbol;Acc:HGNC:5019]
OrganismCanis lupus familiaris (dog)
Synonym(s)nkx5-1
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
45.28
  • 45.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.24e4
  • 1.24e4
  • 1.81e4
44.53
  • 44.53
  • 18.94
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
  • 1.65e4
34.27
  • 34.27
  • 26.01
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
32.96
  • 32.96
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
32.22
  • 32.22
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.61
  • 30.61
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
28.85
  • 28.85
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
28.10
  • 28.10
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.62e4
  • 1.62e4
27.76
  • 27.76
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
25.82
  • 25.82
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.81e4
  • 1.81e4
19.20
  • 19.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012698.

Cross-references

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