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C. lupus familiaris Gene: COCH - ENSCAFG00000012762 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012762
NameCOCH
Descriptioncochlin [Source:HGNC Symbol;Acc:HGNC:2180]
OrganismCanis lupus familiaris (dog)
Synonym(s)coch-5b2, dfna31, dfna9
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
125
  • 125
  • 187
  • 202
99.45
  • 99.45
  • 99.17
  • 99.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
94.41
  • 94.41
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.58e3
  • 1.58e3
  • 1.35e4
92.93
  • 92.93
  • 39.73
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.26e3
  • 4.26e3
80.96
  • 80.96
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
6.25e3
  • 6.25e3
72.04
  • 72.04
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
7.71e3
  • 7.71e3
65.53
  • 65.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.75e3
  • 7.75e3
  • 9.09e3
65.36
  • 65.36
  • 59.34
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
8.22e3
  • 8.22e3
63.24
  • 63.24
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.55e3
  • 8.55e3
61.77
  • 61.77
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.90e3
  • 8.90e3
  • 1.27e4
60.22
  • 60.22
  • 43.19
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
8.97e3
  • 8.97e3
59.89
  • 59.89
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.04e3
  • 9.04e3
59.59
  • 59.59
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.12e3
  • 9.12e3
  • 1.43e4
  • 1.43e4
59.21
  • 59.21
  • 36.26
  • 36.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.22e3
  • 9.22e3
  • 1.13e4
58.77
  • 58.77
  • 49.68
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.44e3
  • 9.44e3
  • 1.24e4
57.81
  • 57.81
  • 44.38
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.82e3
  • 9.82e3
  • 1.11e4
56.10
  • 56.10
  • 50.18
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
9.84e3
  • 9.84e3
55.98
  • 55.98
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
  • 1.09e4
  • 1.33e4
55.54
  • 55.54
  • 51.34
  • 40.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.00e4
  • 1.00e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.98
  • 54.98
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.20e4
54.68
  • 54.68
  • 46.45
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
54.02
  • 54.02
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.54
  • 53.54
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.38
  • 53.38
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
53.00
  • 53.00
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.24e4
52.14
  • 52.14
  • 44.61
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.86
  • 51.86
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.63
  • 51.63
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
  • 1.13e4
51.42
  • 51.42
  • 49.34
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
  • 1.16e4
51.31
  • 51.31
  • 47.94
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
49.00
  • 49.00
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.14e4
  • 1.14e4
48.81
  • 48.81
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
  • 1.22e4
47.87
  • 47.87
  • 45.24
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.31e4
47.52
  • 47.52
  • 41.57
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.71
  • 45.71
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.69
  • 45.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
  • 1.24e4
  • 1.25e4
  • 1.28e4
  • 1.35e4
44.69
  • 44.69
  • 44.51
  • 44.25
  • 42.84
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.48
  • 44.48
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.25e4
44.48
  • 44.48
  • 43.94
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
44.41
  • 44.41
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
44.26
  • 44.26
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.64
  • 43.64
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
43.30
  • 43.30
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
  • 1.35e4
42.91
  • 42.91
  • 39.44
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
42.81
  • 42.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
42.68
  • 42.68
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.84
  • 41.84
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.45
  • 41.45
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.43
  • 41.43
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.30
  • 41.30
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
37.06
  • 37.06
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.23
  • 34.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.14
  • 30.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012762.

Cross-references

EnsemblENSCAFG00000012762 (COCH)
HGNCHGNC:2180 (COCH)
EMBLAAEX03005650
Uniprot/SPTREMBLF1PLQ5, F1PLQ5_CANLF

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