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C. lupus familiaris Gene: TMEM50A - ENSCAFG00000012882 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000012882
NameTMEM50A
Descriptiontransmembrane protein 50A [Source:HGNC Symbol;Acc:HGNC:30590]
OrganismCanis lupus familiaris (dog)
Synonym(s)smp1
Orthologs(s)23 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
247
  • 247
  • 384
98.90
  • 98.90
  • 98.29
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
252
  • 252
  • 464
98.88
  • 98.88
  • 97.93
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
262
  • 262
  • 795
98.83
  • 98.83
  • 96.45
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
266
  • 266
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
268
  • 268
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
284
  • 284
  • 796
98.73
  • 98.73
  • 96.44
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
297
  • 297
  • 341
  • 650
98.68
  • 98.68
  • 98.48
  • 97.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
309
  • 309
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
309
  • 309
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
310
  • 310
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
311
  • 311
  • 466
98.61
  • 98.61
  • 97.92
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
342
  • 342
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
363
  • 363
98.38
  • 98.38
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
372
  • 372
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
372
  • 372
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
374
  • 374
  • 422
  • 517
98.33
  • 98.33
  • 98.12
  • 97.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
392
  • 392
  • 414
  • 678
98.25
  • 98.25
  • 98.15
  • 96.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
399
  • 399
  • 420
98.22
  • 98.22
  • 98.13
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
401
  • 401
98.21
  • 98.21
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
409
  • 409
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
413
  • 413
  • 484
98.16
  • 98.16
  • 97.84
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
426
  • 426
98.10
  • 98.10
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
428
  • 428
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
431
  • 431
  • 580
98.08
  • 98.08
  • 97.41
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
447
  • 447
98.01
  • 98.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
447
  • 447
  • 536
  • 742
  • 864
  • 973
98.01
  • 98.01
  • 97.61
  • 96.69
  • 96.14
  • 95.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
452
  • 452
97.98
  • 97.98
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
494
  • 494
97.80
  • 97.80
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
499
  • 499
97.77
  • 97.77
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
503
  • 503
  • 738
97.75
  • 97.75
  • 96.71
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
528
  • 528
97.64
  • 97.64
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
579
  • 579
  • 909
97.42
  • 97.42
  • 95.94
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
611
  • 611
97.27
  • 97.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
663
  • 663
  • 849
97.04
  • 97.04
  • 96.21
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
670
  • 670
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
707
  • 707
  • 714
96.84
  • 96.84
  • 96.81
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
730
  • 730
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
737
  • 737
96.71
  • 96.71
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
743
  • 743
96.68
  • 96.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
746
  • 746
96.67
  • 96.67
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
821
  • 821
96.33
  • 96.33
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
832
  • 832
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
835
  • 835
96.27
  • 96.27
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
866
  • 866
96.13
  • 96.13
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
941
  • 941
  • 1.06e3
95.80
  • 95.80
  • 95.27
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.02e3
  • 1.02e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.04e3
  • 1.04e3
  • 1.09e3
95.34
  • 95.34
  • 95.14
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.10e3
  • 1.10e3
95.10
  • 95.10
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.16e3
  • 1.16e3
94.83
  • 94.83
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
94.46
  • 94.46
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.24e3
  • 1.24e3
94.45
  • 94.45
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.50e3
  • 1.50e3
93.29
  • 93.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.66e3
  • 1.66e3
  • 3.21e3
92.56
  • 92.56
  • 85.65
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000012882.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000012882.

Cross-references

EnsemblENSCAFG00000012882 (TMEM50A)
HGNCHGNC:30590 (TMEM50A)
EMBLAAEX03001730, AAEX03001731, AAEX03001732
Uniprot/SPTREMBLE2RAM1, E2RAM1_CANLF

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