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C. lupus familiaris Gene: FAM196A - ENSCAFG00000013123 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013123
NameFAM196A
Descriptionfamily with sequence similarity 196 member A [Source:HGNC Symbol;Acc:HGNC:33859]
OrganismCanis lupus familiaris (dog)
Synonym(s)c10orf141, flj45557
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
51.11
  • 51.11
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
48.35
  • 48.35
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.37e4
45.81
  • 45.81
  • 38.77
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.46e4
40.88
  • 40.88
  • 34.50
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.54
  • 40.54
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
39.53
  • 39.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
38.29
  • 38.29
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.38
  • 37.38
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
36.09
  • 36.09
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
35.75
  • 35.75
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
35.44
  • 35.44
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
34.69
  • 34.69
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.91
  • 33.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.51e4
  • 1.51e4
32.34
  • 32.34
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
  • 1.64e4
30.81
  • 30.81
  • 26.77
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
1.55e4
  • 1.55e4
30.76
  • 30.76
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.69e4
29.67
  • 29.67
  • 24.44
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
29.64
  • 29.64
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
  • 1.79e4
28.72
  • 28.72
  • 20.12
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
28.05
  • 28.05
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.61
  • 27.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.67e4
  • 1.67e4
  • 1.68e4
  • 1.74e4
  • 1.78e4
25.34
  • 25.34
  • 24.77
  • 22.24
  • 20.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
24.42
  • 24.42
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.70e4
  • 1.70e4
  • 1.70e4
24.05
  • 24.05
  • 23.97
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000013123.

Cross-references

EnsemblENSCAFG00000013123 (FAM196A)
HGNCHGNC:33859 (FAM196A)
EMBLAAEX03015642
Uniprot/SPTREMBLE2REJ4, E2REJ4_CANLF, J9P2E0, J9P2E0_CANLF

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