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C. lupus familiaris Gene: VPS8 - ENSCAFG00000013170 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013170
NameVPS8
DescriptionVPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
OrganismCanis lupus familiaris (dog)
Synonym(s)flj32099, kiaa0804
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
3.66e3
  • 3.66e3
83.64
  • 83.64
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
3.93e3
  • 3.93e3
82.42
  • 82.42
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
3.98e3
  • 3.98e3
82.23
  • 82.23
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
4.27e3
  • 4.27e3
80.90
  • 80.90
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.30e3
  • 4.30e3
80.76
  • 80.76
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.64e3
  • 4.64e3
79.27
  • 79.27
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
4.82e3
  • 4.82e3
78.47
  • 78.47
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.82e3
  • 4.82e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.14e3
  • 5.14e3
  • 5.91e3
77.03
  • 77.03
  • 73.56
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.21e3
  • 5.21e3
  • 7.35e3
76.72
  • 76.72
  • 67.14
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
5.23e3
  • 5.23e3
76.60
  • 76.60
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
5.28e3
  • 5.28e3
  • 6.02e3
  • 8.48e3
76.41
  • 76.41
  • 73.10
  • 62.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.29e3
  • 5.29e3
  • 8.48e3
76.33
  • 76.33
  • 62.09
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
5.32e3
  • 5.32e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.32e3
  • 5.32e3
76.20
  • 76.20
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
5.42e3
  • 5.42e3
75.79
  • 75.79
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.50e3
  • 5.50e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.51e3
  • 5.51e3
  • 7.09e3
75.37
  • 75.37
  • 68.29
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
5.62e3
  • 5.62e3
74.87
  • 74.87
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.63e3
  • 5.63e3
  • 6.81e3
74.85
  • 74.85
  • 69.53
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
5.79e3
  • 5.79e3
74.10
  • 74.10
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.84e3
  • 5.84e3
  • 6.41e3
73.90
  • 73.90
  • 71.35
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
5.96e3
  • 5.96e3
73.37
  • 73.37
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.96e3
  • 5.96e3
  • 6.75e3
73.36
  • 73.36
  • 69.82
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
5.97e3
  • 5.97e3
  • 6.05e3
  • 7.75e3
  • 7.96e3
  • 9.13e3
73.32
  • 73.32
  • 72.94
  • 65.37
  • 64.40
  • 59.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.01e3
  • 6.01e3
  • 7.18e3
73.15
  • 73.15
  • 67.88
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
6.08e3
  • 6.08e3
72.82
  • 72.82
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
6.11e3
  • 6.11e3
72.66
  • 72.66
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
6.13e3
  • 6.13e3
72.61
  • 72.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
6.19e3
  • 6.19e3
  • 6.33e3
72.30
  • 72.30
  • 71.72
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.25e3
  • 6.25e3
  • 6.43e3
72.05
  • 72.05
  • 71.24
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.44e3
  • 6.44e3
  • 7.79e3
71.21
  • 71.21
  • 65.18
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
6.59e3
  • 6.59e3
  • 7.30e3
  • 8.20e3
70.56
  • 70.56
  • 67.34
  • 63.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
6.71e3
  • 6.71e3
  • 7.54e3
70.01
  • 70.01
  • 66.26
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
6.73e3
  • 6.73e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
6.87e3
  • 6.87e3
69.29
  • 69.29
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.88e3
  • 6.88e3
69.22
  • 69.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
6.95e3
  • 6.95e3
68.93
  • 68.93
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
7.03e3
  • 7.03e3
68.58
  • 68.58
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
7.06e3
  • 7.06e3
68.45
  • 68.45
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
7.10e3
  • 7.10e3
68.26
  • 68.26
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
7.19e3
  • 7.19e3
67.83
  • 67.83
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.30e3
  • 7.30e3
67.35
  • 67.35
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
7.45e3
  • 7.45e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
7.51e3
  • 7.51e3
  • 8.30e3
  • 8.77e3
66.44
  • 66.44
  • 62.91
  • 60.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
7.52e3
  • 7.52e3
  • 7.93e3
66.38
  • 66.38
  • 64.56
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
7.75e3
  • 7.75e3
65.34
  • 65.34
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
  • 9.67e3
64.54
  • 64.54
  • 56.75
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
8.07e3
  • 8.07e3
63.91
  • 63.91
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.16e3
  • 8.16e3
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
8.65e3
  • 8.65e3
61.33
  • 61.33
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
8.66e3
  • 8.66e3
61.27
  • 61.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000013170.

Cross-references

EnsemblENSCAFG00000013170 (VPS8)
HGNCHGNC:29122 (VPS8)
EMBLAAEX03017288
Uniprot/SPTREMBLF1PI72, F1PI72_CANLF, J9P2S0, J9P2S0_CANLF

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