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C. lupus familiaris Gene: - ENSCAFG00000013249 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013249
Name-
DescriptionElongation factor 1-alpha [Source:UniProtKB/TrEMBL;Acc:E2RJ31]
OrganismCanis lupus familiaris (dog)
Orthologs(s)15 orthologs
Paralog(s)45 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.73e3
  • 1.73e3
92.25
  • 92.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.31e3
  • 2.31e3
  • 1.54e4
89.66
  • 89.66
  • 31.35
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
2.57e3
  • 2.57e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.78e3
  • 3.78e3
  • 1.38e4
83.10
  • 83.10
  • 38.33
AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
6.93e3
  • 6.93e3
69.00
  • 69.00
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
8.27e3
  • 8.27e3
63.03
  • 63.03
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
9.87e3
  • 9.87e3
55.88
  • 55.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
  • 1.48e4
  • 1.54e4
47.79
  • 47.79
  • 34.04
  • 31.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.96
  • 41.96
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.70
  • 41.70
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
  • 1.35e4
41.61
  • 41.61
  • 39.43
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.87
  • 38.87
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
35.75
  • 35.75
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
35.68
  • 35.68
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
35.58
  • 35.58
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
34.72
  • 34.72
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.49e4
  • 1.49e4
33.43
  • 33.43
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.70
  • 30.70
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.32
  • 30.32
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
30.18
  • 30.18
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.56e4
  • 1.56e4
30.04
  • 30.04
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.75
  • 29.75
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
27.30
  • 27.30
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
27.09
  • 27.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
24.56
  • 24.56
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
23.43
  • 23.43
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
1.76e4
  • 1.76e4
21.22
  • 21.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia20 genesCompare expression
Bilateria24 genesCompare expression
Opisthokonta35 genesCompare expression
Eukaryota45 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000013249.

Cross-references

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