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C. lupus familiaris Gene: HOXD8 - ENSCAFG00000013450 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013450
NameHOXD8
Descriptionhomeobox D8 [Source:HGNC Symbol;Acc:HGNC:5139]
OrganismCanis lupus familiaris (dog)
Synonym(s)hox4, hox4e
Orthologs(s)9 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
339
  • 339
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
438
  • 438
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
569
  • 569
  • 1.18e3
97.46
  • 97.46
  • 94.75
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
685
  • 685
  • 2.79e3
96.94
  • 96.94
  • 87.54
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
739
  • 739
  • 1.23e3
96.70
  • 96.70
  • 94.49
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
748
  • 748
  • 1.11e3
96.66
  • 96.66
  • 95.05
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
974
  • 974
  • 7.78e3
95.65
  • 95.65
  • 65.19
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.05e3
  • 1.05e3
95.30
  • 95.30
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.22e3
  • 1.22e3
94.57
  • 94.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
  • 3.37e3
93.75
  • 93.75
  • 84.95
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.54e3
  • 1.54e3
93.13
  • 93.13
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.63e3
  • 1.63e3
92.70
  • 92.70
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
  • 4.50e3
91.69
  • 91.69
  • 79.89
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.96e3
  • 1.96e3
91.26
  • 91.26
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
2.03e3
  • 2.03e3
90.92
  • 90.92
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
2.05e3
  • 2.05e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.09e3
  • 2.09e3
90.65
  • 90.65
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.59e3
  • 2.59e3
88.43
  • 88.43
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
3.24e3
  • 3.24e3
85.53
  • 85.53
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
3.37e3
  • 3.37e3
  • 1.28e4
84.95
  • 84.95
  • 42.62
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
3.92e3
  • 3.92e3
82.47
  • 82.47
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.02e3
  • 4.02e3
  • 8.96e3
  • 1.02e4
82.01
  • 82.01
  • 59.95
  • 54.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.12e3
  • 4.12e3
  • 4.64e3
81.58
  • 81.58
  • 79.26
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
5.82e3
  • 5.82e3
73.98
  • 73.98
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
5.88e3
  • 5.88e3
  • 1.16e4
73.71
  • 73.71
  • 48.20
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
6.22e3
  • 6.22e3
72.20
  • 72.20
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
  • 1.14e4
  • 1.19e4
65.07
  • 65.07
  • 49.15
  • 46.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.01e3
  • 8.01e3
  • 1.55e4
64.20
  • 64.20
  • 30.72
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
8.33e3
  • 8.33e3
62.75
  • 62.75
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
8.63e3
  • 8.63e3
61.42
  • 61.42
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
8.67e3
  • 8.67e3
61.25
  • 61.25
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.68e3
  • 8.68e3
  • 9.43e3
61.16
  • 61.16
  • 57.83
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
9.30e3
  • 9.30e3
58.42
  • 58.42
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.32e3
  • 9.32e3
  • 1.00e4
58.35
  • 58.35
  • 55.18
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.97e3
  • 9.97e3
55.43
  • 55.43
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.01e4
  • 1.01e4
  • 1.10e4
54.93
  • 54.93
  • 50.68
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
54.03
  • 54.03
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.19
  • 51.19
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.28
  • 50.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.19e4
  • 1.19e4
  • 1.31e4
  • 1.34e4
46.66
  • 46.66
  • 41.38
  • 39.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
45.14
  • 45.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
  • 1.33e4
  • 1.62e4
  • 1.67e4
  • 2.08e4
40.78
  • 40.78
  • 40.71
  • 27.68
  • 25.16
  • 7.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.09
  • 40.09
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.61e4
39.22
  • 39.22
  • 28.06
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
32.23
  • 32.23
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
27.61
  • 27.61
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
19.34
  • 19.34
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.86e4
  • 1.86e4
16.99
  • 16.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria1 species1 geneCompare expression
Boreoeutheria7 species7 genesCompare expression
Theria8 species8 genesCompare expression
Tetrapoda9 species9 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000013450.

Cross-references

EnsemblENSCAFG00000013450 (HOXD8)
HGNCHGNC:5139 (HOXD8)
EMBLAAEX03017789
Uniprot/SPTREMBLF1P8H3, F1P8H3_CANLF

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