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C. lupus familiaris Gene: GABARAPL1 - ENSCAFG00000013479 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013479
NameGABARAPL1
DescriptionGABA(A) receptor-associated protein like 1 [Source:HGNC Symbol;Acc:HGNC:4068]
OrganismCanis lupus familiaris (dog)
Synonym(s)apg8l, atg8b, atg8l, gec1
Orthologs(s)25 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
18.0
  • 18.0
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
20.0
  • 20.0
  • 211
99.92
  • 99.92
  • 99.06
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
34.2
  • 34.2
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
52.0
  • 52.0
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
57.0
  • 57.0
  • 87.0
99.75
  • 99.75
  • 99.62
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
63.0
  • 63.0
  • 196
99.72
  • 99.72
  • 99.13
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
76.0
  • 76.0
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
80.6
  • 80.6
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
82.0
  • 82.0
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
88.0
  • 88.0
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
89.8
  • 89.8
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
90.5
  • 90.5
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
102
  • 102
99.55
  • 99.55
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
109
  • 109
99.52
  • 99.52
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
115
  • 115
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
116
  • 116
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
121
  • 121
  • 440
99.46
  • 99.46
  • 98.04
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
124
  • 124
99.45
  • 99.45
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
128
  • 128
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
133
  • 133
99.41
  • 99.41
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
152
  • 152
99.32
  • 99.32
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
162
  • 162
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
171
  • 171
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
174
  • 174
99.23
  • 99.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
175
  • 175
  • 1.07e3
99.22
  • 99.22
  • 95.23
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
175
  • 175
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
176
  • 176
  • 196
  • 411
99.22
  • 99.22
  • 99.13
  • 98.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
179
  • 179
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
188
  • 188
  • 3.59e3
99.16
  • 99.16
  • 83.95
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
190
  • 190
  • 218
  • 234
  • 678
  • 697
99.15
  • 99.15
  • 99.03
  • 98.96
  • 96.97
  • 96.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
201
  • 201
  • 325
99.10
  • 99.10
  • 98.55
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
208
  • 208
  • 316
  • 355
99.07
  • 99.07
  • 98.59
  • 98.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
237
  • 237
  • 472
98.94
  • 98.94
  • 97.89
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
251
  • 251
  • 4.74e3
98.88
  • 98.88
  • 78.81
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
263
  • 263
  • 318
  • 523
98.83
  • 98.83
  • 98.58
  • 97.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
267
  • 267
  • 785
98.81
  • 98.81
  • 96.49
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
277
  • 277
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
282
  • 282
  • 304
98.74
  • 98.74
  • 98.64
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
287
  • 287
98.72
  • 98.72
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
338
  • 338
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
340
  • 340
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
385
  • 385
  • 725
98.28
  • 98.28
  • 96.76
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
452
  • 452
97.98
  • 97.98
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
460
  • 460
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
460
  • 460
  • 947
97.95
  • 97.95
  • 95.77
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
540
  • 540
  • 633
97.59
  • 97.59
  • 97.17
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
561
  • 561
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
702
  • 702
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.08e3
  • 1.08e3
95.19
  • 95.19
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.39e3
  • 1.39e3
93.78
  • 93.78
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.65e3
  • 1.65e3
92.64
  • 92.64
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
1.94e3
  • 1.94e3
91.32
  • 91.32
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
90.84
  • 90.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000013479.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Opisthokonta5 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000013479.

Cross-references

EnsemblENSCAFG00000013479 (GABARAPL1)
HGNCHGNC:4068 (GABARAPL1)
EMBLAAEX03015258
Uniprot/SPTREMBLF1P7N8, F1P7N8_CANLF

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