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C. lupus familiaris Gene: XCR1 - ENSCAFG00000013815 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013815
NameXCR1
Descriptionchemokine (C motif) receptor 1 [Source:HGNC Symbol;Acc:HGNC:1625]
OrganismCanis lupus familiaris (dog)
Synonym(s)ccxcr1, gpr5
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.48e3
  • 4.48e3
  • 7.50e3
  • 1.46e4
79.96
  • 79.96
  • 66.49
  • 34.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.54e3
  • 5.54e3
  • 1.48e4
75.25
  • 75.25
  • 33.99
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
7.94e3
  • 7.94e3
64.50
  • 64.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.07e3
  • 9.07e3
  • 2.04e4
59.45
  • 59.45
  • 8.88
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
54.90
  • 54.90
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
52.43
  • 52.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.09e4
  • 1.09e4
  • 1.36e4
  • 1.39e4
  • 1.40e4
  • 1.78e4
51.32
  • 51.32
  • 39.37
  • 37.78
  • 37.32
  • 20.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.24
  • 51.24
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
45.58
  • 45.58
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.76
  • 44.76
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.43e4
39.90
  • 39.90
  • 35.87
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.04
  • 39.04
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
  • 1.40e4
38.37
  • 38.37
  • 37.36
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 1.42e4
37.10
  • 37.10
  • 36.30
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
36.50
  • 36.50
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.07
  • 35.07
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
34.78
  • 34.78
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
34.75
  • 34.75
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
34.20
  • 34.20
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
  • 1.57e4
33.86
  • 33.86
  • 29.76
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
31.94
  • 31.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
29.25
  • 29.25
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
29.22
  • 29.22
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
28.02
  • 28.02
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
27.93
  • 27.93
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
  • 1.70e4
27.79
  • 27.79
  • 24.11
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
27.46
  • 27.46
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
25.31
  • 25.31
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
22.65
  • 22.65
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
20.42
  • 20.42
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
20.30
  • 20.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000013815.

Cross-references

EnsemblENSCAFG00000013815 (XCR1)
HGNCHGNC:1625 (XCR1)
EMBLAAEX03012248
Uniprot/SPTREMBLF1PNM9, F1PNM9_CANLF

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