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C. lupus familiaris Gene: MESDC1 - ENSCAFG00000013854 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013854
NameMESDC1
Descriptionmesoderm development candidate 1 [Source:HGNC Symbol;Acc:HGNC:13519]
OrganismCanis lupus familiaris (dog)
Synonym(s)mgc99595
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.98e3
  • 1.98e3
  • 7.26e3
  • 8.02e3
  • 1.20e4
  • 1.23e4
91.15
  • 91.15
  • 67.53
  • 64.14
  • 46.43
  • 44.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
2.72e3
  • 2.72e3
  • 1.04e4
  • 1.07e4
87.86
  • 87.86
  • 53.44
  • 52.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.81e3
  • 2.81e3
  • 1.03e4
  • 1.10e4
87.44
  • 87.44
  • 54.16
  • 50.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
3.16e3
  • 3.16e3
85.88
  • 85.88
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
3.47e3
  • 3.47e3
  • 1.04e4
84.49
  • 84.49
  • 53.40
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.67e3
  • 3.67e3
83.57
  • 83.57
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
3.74e3
  • 3.74e3
83.29
  • 83.29
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.19e3
  • 4.19e3
  • 1.08e4
  • 1.20e4
81.27
  • 81.27
  • 51.50
  • 46.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
4.38e3
  • 4.38e3
80.40
  • 80.40
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.12e3
  • 5.12e3
77.13
  • 77.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.29e3
  • 5.29e3
76.33
  • 76.33
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.37e3
  • 5.37e3
75.98
  • 75.98
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
5.68e3
  • 5.68e3
  • 1.13e4
74.60
  • 74.60
  • 49.65
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
6.01e3
  • 6.01e3
73.15
  • 73.15
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.31e3
  • 6.31e3
71.79
  • 71.79
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.87e3
  • 6.87e3
  • 7.02e3
69.29
  • 69.29
  • 68.59
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
6.89e3
  • 6.89e3
69.19
  • 69.19
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.93e3
  • 6.93e3
69.03
  • 69.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.21e3
  • 7.21e3
  • 1.12e4
67.78
  • 67.78
  • 49.88
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.28e3
  • 7.28e3
  • 1.30e4
67.44
  • 67.44
  • 41.93
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
7.51e3
  • 7.51e3
66.42
  • 66.42
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.52e3
  • 7.52e3
  • 1.14e4
66.37
  • 66.37
  • 49.16
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.17e3
  • 8.17e3
63.46
  • 63.46
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.49e3
  • 8.49e3
  • 1.21e4
62.06
  • 62.06
  • 45.69
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.49e3
  • 8.49e3
62.04
  • 62.04
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.92e3
  • 8.92e3
  • 9.53e3
60.10
  • 60.10
  • 57.38
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
9.54e3
  • 9.54e3
57.35
  • 57.35
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.66e3
  • 9.66e3
  • 1.14e4
56.81
  • 56.81
  • 49.04
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
9.81e3
  • 9.81e3
56.13
  • 56.13
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
9.84e3
  • 9.84e3
55.99
  • 55.99
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
9.93e3
  • 9.93e3
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
9.95e3
  • 9.95e3
55.49
  • 55.49
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
  • 1.32e4
55.04
  • 55.04
  • 40.96
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.41
  • 54.41
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.02e4
  • 1.02e4
  • 1.19e4
54.36
  • 54.36
  • 46.71
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.23
  • 54.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.29e4
53.64
  • 53.64
  • 42.54
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.42
  • 53.42
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
49.70
  • 49.70
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
49.00
  • 49.00
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
46.87
  • 46.87
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
46.83
  • 46.83
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
  • 1.21e4
46.62
  • 46.62
  • 46.07
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.21e4
  • 1.21e4
46.08
  • 46.08
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
46.04
  • 46.04
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
45.64
  • 45.64
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.23e4
  • 1.23e4
45.16
  • 45.16
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.17
  • 42.17
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.03
  • 40.03
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.82
  • 38.82
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
38.25
  • 38.25
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
37.13
  • 37.13
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.71
  • 33.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Amniota11 species11 genesCompare expression
Tetrapoda12 species12 genesCompare expression
Euteleostomi13 species13 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000013854.

Cross-references

EnsemblENSCAFG00000013854 (MESDC1)
HGNCHGNC:13519 (MESDC1)
EMBLAAEX03002369
Uniprot/SPTREMBLE2RQ95, E2RQ95_CANLF

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