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C. lupus familiaris Gene: SLC6A20 - ENSCAFG00000013947 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000013947
NameSLC6A20
Descriptionsolute carrier family 6 (proline IMINO transporter), member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
OrganismCanis lupus familiaris (dog)
Synonym(s)xt3, xtrp3
Orthologs(s)18 orthologs
Paralog(s)15 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.27e3
  • 1.27e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
90.73
  • 90.73
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.54e3
  • 2.54e3
  • 1.32e4
88.63
  • 88.63
  • 40.89
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.85e3
  • 2.85e3
  • 1.55e4
87.27
  • 87.27
  • 30.73
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
2.88e3
  • 2.88e3
  • 4.08e3
  • 9.30e3
  • 1.27e4
  • 1.28e4
87.12
  • 87.12
  • 81.74
  • 58.40
  • 43.01
  • 42.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
4.14e3
  • 4.14e3
81.47
  • 81.47
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
4.35e3
  • 4.35e3
80.56
  • 80.56
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
6.53e3
  • 6.53e3
70.81
  • 70.81
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
7.21e3
  • 7.21e3
67.74
  • 67.74
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
7.87e3
  • 7.87e3
64.82
  • 64.82
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
54.14
  • 54.14
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
54.10
  • 54.10
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
52.61
  • 52.61
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.26e4
  • 1.29e4
52.08
  • 52.08
  • 43.47
  • 42.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
51.22
  • 51.22
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
47.25
  • 47.25
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.38
  • 44.38
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.57e4
43.65
  • 43.65
  • 29.84
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
40.52
  • 40.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.42
  • 40.42
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
35.96
  • 35.96
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
34.86
  • 34.86
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.31
  • 34.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.54
  • 33.54
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.49e4
  • 1.49e4
33.42
  • 33.42
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.25
  • 33.25
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
31.78
  • 31.78
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
  • 1.83e4
30.40
  • 30.40
  • 18.34
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.78
  • 29.78
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.69
  • 29.69
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.62
  • 29.62
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.72e4
29.17
  • 29.17
  • 23.23
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
28.53
  • 28.53
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.67e4
  • 1.67e4
25.51
  • 25.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
23.50
  • 23.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000013947.

Paralogs (same species)

Paralogy information comes from OMA : ENSCAFG00000013947.

Cross-references

EnsemblENSCAFG00000013947 (SLC6A20)
HGNCHGNC:30927 (SLC6A20)
EMBLAAEX03012252
Uniprot/SPTREMBLF1PPE0, F1PPE0_CANLF

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