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C. lupus familiaris Gene: CLEC3B - ENSCAFG00000014049 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000014049
NameCLEC3B
DescriptionC-type lectin domain family 3 member B [Source:HGNC Symbol;Acc:HGNC:11891]
OrganismCanis lupus familiaris (dog)
Synonym(s)tn, tna
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
158
  • 158
  • 2.46e3
99.30
  • 99.30
  • 89.01
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
177
  • 177
  • 1.44e4
99.21
  • 99.21
  • 35.46
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
267
  • 267
  • 492
98.81
  • 98.81
  • 97.81
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
301
  • 301
  • 1.01e3
98.66
  • 98.66
  • 95.51
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
369
  • 369
98.35
  • 98.35
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
446
  • 446
98.01
  • 98.01
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
453
  • 453
97.98
  • 97.98
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
469
  • 469
  • 579
97.91
  • 97.91
  • 97.42
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
490
  • 490
97.81
  • 97.81
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
498
  • 498
97.78
  • 97.78
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
499
  • 499
  • 2.43e3
97.77
  • 97.77
  • 89.13
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
596
  • 596
  • 630
  • 1.41e4
97.34
  • 97.34
  • 97.19
  • 36.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
656
  • 656
97.07
  • 97.07
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
665
  • 665
97.03
  • 97.03
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
702
  • 702
  • 3.58e3
96.87
  • 96.87
  • 84.00
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
718
  • 718
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
792
  • 792
  • 1.14e3
96.46
  • 96.46
  • 94.90
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
836
  • 836
96.27
  • 96.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.01e3
  • 1.01e3
  • 8.42e3
95.47
  • 95.47
  • 62.36
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.02e3
  • 1.02e3
95.45
  • 95.45
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.03e3
  • 1.03e3
  • 4.93e3
95.39
  • 95.39
  • 77.95
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.27e3
  • 1.27e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
  • 4.01e3
  • 5.89e3
93.01
  • 93.01
  • 82.09
  • 73.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
  • 8.93e3
89.69
  • 89.69
  • 60.09
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
2.41e3
  • 2.41e3
89.22
  • 89.22
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.50e3
  • 2.50e3
  • 2.90e3
  • 5.46e3
88.81
  • 88.81
  • 87.02
  • 75.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
2.79e3
  • 2.79e3
87.54
  • 87.54
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.84e3
  • 2.84e3
  • 6.19e3
87.31
  • 87.31
  • 72.34
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
2.92e3
  • 2.92e3
86.93
  • 86.93
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
3.27e3
  • 3.27e3
85.39
  • 85.39
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
84.01
  • 84.01
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
3.63e3
  • 3.63e3
83.78
  • 83.78
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
3.69e3
  • 3.69e3
83.52
  • 83.52
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.68e3
  • 4.68e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.05e3
  • 5.05e3
77.42
  • 77.42
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.16e3
  • 5.16e3
  • 1.10e4
76.92
  • 76.92
  • 50.67
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
5.33e3
  • 5.33e3
76.18
  • 76.18
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
5.55e3
  • 5.55e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
6.30e3
  • 6.30e3
71.82
  • 71.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
6.54e3
  • 6.54e3
70.74
  • 70.74
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
6.60e3
  • 6.60e3
70.51
  • 70.51
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
6.74e3
  • 6.74e3
69.87
  • 69.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.97e3
  • 6.97e3
68.82
  • 68.82
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
7.03e3
  • 7.03e3
68.55
  • 68.55
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
7.54e3
  • 7.54e3
  • 9.23e3
  • 9.67e3
  • 1.18e4
  • 1.46e4
66.29
  • 66.29
  • 58.74
  • 56.75
  • 47.42
  • 34.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.17e3
  • 8.17e3
  • 1.13e4
63.47
  • 63.47
  • 49.50
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
8.67e3
  • 8.67e3
61.25
  • 61.25
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.22e3
  • 9.22e3
58.77
  • 58.77
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.02e4
  • 1.02e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.63
  • 50.63
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.45
  • 49.45
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
41.66
  • 41.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000014049.

Cross-references

EnsemblENSCAFG00000014049 (CLEC3B)
HGNCHGNC:11891 (CLEC3B)
Uniprot/SPTREMBLE2RPB8, E2RPB8_CANLF

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