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C. lupus familiaris Gene: RBP5 - ENSCAFG00000014091 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000014091
NameRBP5
Descriptionretinol binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15847]
OrganismCanis lupus familiaris (dog)
Synonym(s)crabp1, crbpiii
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
630
  • 630
  • 900
  • 1.31e3
  • 1.44e3
  • 4.05e3
97.19
  • 97.19
  • 95.98
  • 94.16
  • 93.55
  • 81.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.11e3
  • 2.11e3
90.57
  • 90.57
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.34e3
  • 3.34e3
  • 8.70e3
85.09
  • 85.09
  • 61.12
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
7.61e3
  • 7.61e3
65.97
  • 65.97
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
  • 1.62e4
54.35
  • 54.35
  • 27.66
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
53.90
  • 53.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.83e4
50.69
  • 50.69
  • 18.22
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.94
  • 48.94
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.62
  • 48.62
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
  • 1.49e4
46.66
  • 46.66
  • 33.48
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.64e4
44.31
  • 44.31
  • 26.71
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.40e4
43.80
  • 43.80
  • 37.33
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.72e4
43.18
  • 43.18
  • 23.18
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.29e4
  • 1.42e4
42.68
  • 42.68
  • 42.31
  • 36.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.82
  • 36.82
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.35
  • 35.35
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
  • 2.00e4
34.53
  • 34.53
  • 10.61
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.76
  • 33.76
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.48e4
  • 1.48e4
  • 1.75e4
  • 1.76e4
33.70
  • 33.70
  • 21.86
  • 21.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.63
  • 32.63
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.59
  • 31.59
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
31.29
  • 31.29
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.55e4
  • 1.55e4
30.49
  • 30.49
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
30.41
  • 30.41
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.33
  • 30.33
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
  • 1.68e4
29.02
  • 29.02
  • 24.84
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.53
  • 27.53
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.90e4
  • 1.90e4
15.19
  • 15.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000014091.

Cross-references

EnsemblENSCAFG00000014091 (RBP5)
HGNCHGNC:15847 (RBP5)
EMBLAAEX03015268
Uniprot/SPTREMBLE2RMF4, E2RMF4_CANLF

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