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C. lupus familiaris Gene: NUP88 - ENSCAFG00000015552 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000015552
NameNUP88
Descriptionnucleoporin 88kDa [Source:HGNC Symbol;Acc:HGNC:8067]
OrganismCanis lupus familiaris (dog)
Synonym(s)mgc8530
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.97e3
  • 1.97e3
  • 2.98e3
  • 3.49e3
  • 4.34e3
  • 4.53e3
91.19
  • 91.19
  • 86.69
  • 84.39
  • 80.60
  • 79.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.28e3
  • 2.28e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
2.33e3
  • 2.33e3
89.58
  • 89.58
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
2.48e3
  • 2.48e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.48e3
  • 2.48e3
  • 3.34e3
88.90
  • 88.90
  • 85.07
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
2.77e3
  • 2.77e3
87.61
  • 87.61
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
2.94e3
  • 2.94e3
  • 4.37e3
86.86
  • 86.86
  • 80.46
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
3.28e3
  • 3.28e3
  • 3.67e3
  • 4.89e3
85.31
  • 85.31
  • 83.58
  • 78.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
3.31e3
  • 3.31e3
  • 4.27e3
85.21
  • 85.21
  • 80.90
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
3.35e3
  • 3.35e3
85.02
  • 85.02
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
3.43e3
  • 3.43e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.45e3
  • 3.45e3
  • 4.91e3
84.57
  • 84.57
  • 78.05
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
3.52e3
  • 3.52e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
3.55e3
  • 3.55e3
  • 4.69e3
84.11
  • 84.11
  • 79.01
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.60e3
  • 3.60e3
  • 3.92e3
83.90
  • 83.90
  • 82.46
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
3.61e3
  • 3.61e3
83.87
  • 83.87
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
3.68e3
  • 3.68e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.70e3
  • 3.70e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.71e3
  • 3.71e3
  • 4.85e3
83.44
  • 83.44
  • 78.30
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
3.71e3
  • 3.71e3
83.41
  • 83.41
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.74e3
  • 3.74e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.80e3
  • 3.80e3
  • 4.00e3
  • 4.76e3
83.02
  • 83.02
  • 82.12
  • 78.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
3.84e3
  • 3.84e3
82.84
  • 82.84
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.85e3
  • 3.85e3
  • 3.91e3
82.78
  • 82.78
  • 82.52
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
3.86e3
  • 3.86e3
82.76
  • 82.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.94e3
  • 3.94e3
  • 4.46e3
  • 4.81e3
82.39
  • 82.39
  • 80.06
  • 78.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
4.05e3
  • 4.05e3
81.87
  • 81.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
4.15e3
  • 4.15e3
81.44
  • 81.44
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.17e3
  • 4.17e3
81.34
  • 81.34
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.18e3
  • 4.18e3
  • 4.41e3
81.32
  • 81.32
  • 80.27
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.20e3
  • 4.20e3
  • 5.21e3
81.21
  • 81.21
  • 76.69
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.34e3
  • 4.34e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.35e3
  • 4.35e3
  • 4.91e3
80.57
  • 80.57
  • 78.05
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.35e3
  • 4.35e3
  • 5.26e3
80.56
  • 80.56
  • 76.49
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.35e3
  • 4.35e3
  • 4.73e3
80.56
  • 80.56
  • 78.85
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
4.37e3
  • 4.37e3
80.45
  • 80.45
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
4.39e3
  • 4.39e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
4.44e3
  • 4.44e3
80.14
  • 80.14
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.59e3
  • 4.59e3
79.46
  • 79.46
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
4.61e3
  • 4.61e3
79.39
  • 79.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.64e3
  • 4.64e3
  • 5.41e3
79.26
  • 79.26
  • 75.80
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.84e3
  • 4.84e3
78.34
  • 78.34
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
5.00e3
  • 5.00e3
77.64
  • 77.64
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
5.04e3
  • 5.04e3
77.46
  • 77.46
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
5.04e3
  • 5.04e3
77.45
  • 77.45
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.21e3
  • 5.21e3
76.71
  • 76.71
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
5.34e3
  • 5.34e3
76.14
  • 76.14
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
5.58e3
  • 5.58e3
75.05
  • 75.05
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
5.60e3
  • 5.60e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
5.66e3
  • 5.66e3
74.69
  • 74.69
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
5.69e3
  • 5.69e3
74.55
  • 74.55
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
5.84e3
  • 5.84e3
73.90
  • 73.90
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
6.08e3
  • 6.08e3
72.83
  • 72.83
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
6.21e3
  • 6.21e3
72.25
  • 72.25
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
7.64e3
  • 7.64e3
65.86
  • 65.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000015552.

Cross-references

EnsemblENSCAFG00000015552 (NUP88)
HGNCHGNC:8067 (NUP88)
EMBLAAEX03003580, AAEX03003581
Uniprot/SPTREMBLE2QXG1, E2QXG1_CANLF

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