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C. lupus familiaris Gene: HCRT - ENSCAFG00000015615 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000015615
NameHCRT
Descriptionhypocretin (orexin) neuropeptide precursor [Source:HGNC Symbol;Acc:HGNC:4847]
OrganismCanis lupus familiaris (dog)
Synonym(s)ox, ppox
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.60
  • 46.60
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.42e4
45.71
  • 45.71
  • 36.45
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
44.21
  • 44.21
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
42.97
  • 42.97
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
41.72
  • 41.72
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
41.07
  • 41.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
40.25
  • 40.25
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
38.36
  • 38.36
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
  • 1.54e4
37.74
  • 37.74
  • 31.31
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
  • 1.72e4
37.65
  • 37.65
  • 23.26
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
33.80
  • 33.80
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.50e4
  • 1.50e4
32.98
  • 32.98
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
32.23
  • 32.23
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.94e4
  • 2.08e4
32.21
  • 32.21
  • 13.16
  • 7.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.62
  • 31.62
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 2.11e4
31.51
  • 31.51
  • 5.57
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 2.00e4
29.35
  • 29.35
  • 10.61
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
  • 1.72e4
29.01
  • 29.01
  • 23.21
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.59e4
  • 1.59e4
28.76
  • 28.76
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.61e4
  • 1.61e4
28.16
  • 28.16
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.61e4
  • 1.61e4
  • 1.73e4
28.14
  • 28.14
  • 22.84
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 2.13e4
26.49
  • 26.49
  • 4.76
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
26.13
  • 26.13
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
22.23
  • 22.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
18.38
  • 18.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSCAFG00000015615.

Cross-references

EnsemblENSCAFG00000015615 (HCRT)
HGNCHGNC:4847 (HCRT)
EMBLAF285110
Uniprot/SWISSPROTOREX_CANLF, Q9GLF6

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