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C. lupus familiaris Gene: LRTM2 - ENSCAFG00000015985 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000015985
NameLRTM2
Descriptionleucine-rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]
OrganismCanis lupus familiaris (dog)
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
3.66e3
  • 3.66e3
83.64
  • 83.64
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.11e3
  • 4.11e3
81.65
  • 81.65
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
4.48e3
  • 4.48e3
79.97
  • 79.97
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
4.49e3
  • 4.49e3
79.92
  • 79.92
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.82e3
  • 4.82e3
78.45
  • 78.45
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
5.06e3
  • 5.06e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
5.07e3
  • 5.07e3
77.31
  • 77.31
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.74e3
  • 5.74e3
  • 5.77e3
74.34
  • 74.34
  • 74.18
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.29e4
52.26
  • 52.26
  • 42.31
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.21e4
50.46
  • 50.46
  • 45.90
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
48.07
  • 48.07
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
46.09
  • 46.09
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.65
  • 43.65
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.55
  • 38.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.43e4
  • 1.43e4
36.00
  • 36.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
  • 1.46e4
  • 1.48e4
  • 1.57e4
  • 1.57e4
35.37
  • 35.37
  • 34.75
  • 33.88
  • 29.91
  • 29.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
35.12
  • 35.12
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.61e4
35.01
  • 35.01
  • 28.07
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
  • 1.69e4
33.73
  • 33.73
  • 24.36
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.71
  • 33.71
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
31.49
  • 31.49
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.43
  • 31.43
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.58
  • 30.58
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
29.70
  • 29.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
29.46
  • 29.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
29.03
  • 29.03
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
28.46
  • 28.46
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.37
  • 27.37
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
  • 1.79e4
26.20
  • 26.20
  • 19.96
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
  • 1.72e4
23.76
  • 23.76
  • 22.97
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
22.77
  • 22.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000015985.

Cross-references

EnsemblENSCAFG00000015985 (LRTM2)
HGNCHGNC:32443 (LRTM2)
EMBLAAEX03015331, AAEX03015332
Uniprot/SPTREMBLF1PYZ6, F1PYZ6_CANLF

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