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C. lupus familiaris Gene: GIPC1 - ENSCAFG00000016295 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000016295
NameGIPC1
DescriptionGIPC PDZ domain containing family member 1 [Source:HGNC Symbol;Acc:HGNC:1226]
OrganismCanis lupus familiaris (dog)
Synonym(s)c19orf3, gipc, glut1cbp, hs.6454, nip, rgs19ip1, semcap, synectin, tip-2
Orthologs(s)21 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
  • 7.12e3
91.70
  • 91.70
  • 68.18
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
2.48e3
  • 2.48e3
88.93
  • 88.93
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
2.67e3
  • 2.67e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
3.46e3
  • 3.46e3
84.52
  • 84.52
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.78e3
  • 3.78e3
  • 6.75e3
83.11
  • 83.11
  • 69.81
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
3.85e3
  • 3.85e3
82.79
  • 82.79
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.90e3
  • 3.90e3
82.58
  • 82.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.97e3
  • 3.97e3
  • 1.06e4
82.25
  • 82.25
  • 52.56
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
4.13e3
  • 4.13e3
81.53
  • 81.53
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.76e3
  • 4.76e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.79e3
  • 4.79e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
4.91e3
  • 4.91e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.18e3
  • 5.18e3
  • 5.55e3
76.83
  • 76.83
  • 75.19
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
5.31e3
  • 5.31e3
76.26
  • 76.26
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.35e3
  • 5.35e3
  • 8.05e3
76.09
  • 76.09
  • 64.00
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
6.13e3
  • 6.13e3
72.58
  • 72.58
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.18e3
  • 6.18e3
72.36
  • 72.36
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
6.51e3
  • 6.51e3
70.90
  • 70.90
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.55e3
  • 6.55e3
  • 9.15e3
70.72
  • 70.72
  • 59.07
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
6.63e3
  • 6.63e3
70.37
  • 70.37
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
7.04e3
  • 7.04e3
68.54
  • 68.54
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
7.32e3
  • 7.32e3
67.28
  • 67.28
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.33e3
  • 7.33e3
  • 9.25e3
67.24
  • 67.24
  • 58.65
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
  • 1.10e4
  • 1.14e4
  • 1.31e4
  • 1.36e4
66.93
  • 66.93
  • 50.82
  • 49.16
  • 41.37
  • 39.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
7.40e3
  • 7.40e3
  • 1.02e4
66.93
  • 66.93
  • 54.51
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.48e3
  • 7.48e3
  • 8.72e3
66.55
  • 66.55
  • 61.00
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.55e3
  • 7.55e3
  • 7.71e3
  • 7.93e3
66.24
  • 66.24
  • 65.53
  • 64.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
  • 7.82e3
  • 9.01e3
66.21
  • 66.21
  • 65.03
  • 59.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.61e3
  • 7.61e3
65.96
  • 65.96
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
64.07
  • 64.07
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.08e3
  • 8.08e3
  • 8.33e3
63.87
  • 63.87
  • 62.74
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.09e3
  • 8.09e3
  • 8.27e3
63.81
  • 63.81
  • 63.04
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
8.18e3
  • 8.18e3
63.44
  • 63.44
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
8.34e3
  • 8.34e3
62.70
  • 62.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.40e3
  • 8.40e3
  • 9.30e3
  • 9.57e3
62.43
  • 62.43
  • 58.43
  • 57.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
8.53e3
  • 8.53e3
61.85
  • 61.85
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.60e3
  • 8.60e3
61.55
  • 61.55
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.73e3
  • 8.73e3
  • 1.02e4
60.97
  • 60.97
  • 54.28
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
8.90e3
  • 8.90e3
60.19
  • 60.19
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
8.93e3
  • 8.93e3
60.05
  • 60.05
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
9.24e3
  • 9.24e3
  • 9.68e3
58.68
  • 58.68
  • 56.69
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
9.37e3
  • 9.37e3
58.12
  • 58.12
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
9.91e3
  • 9.91e3
55.68
  • 55.68
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
9.95e3
  • 9.95e3
55.49
  • 55.49
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
54.08
  • 54.08
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
53.65
  • 53.65
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.40
  • 53.40
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.08e4
52.48
  • 52.48
  • 51.67
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.25e4
52.13
  • 52.13
  • 44.14
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.72
  • 51.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.13e4
51.29
  • 51.29
  • 49.26
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.38
  • 49.38
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.67
  • 38.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species10 genesCompare expression
Mammalia11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria20 species21 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000016295.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia2 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000016295.

Cross-references

EnsemblENSCAFG00000016295 (GIPC1)
HGNCHGNC:1226 (GIPC1)
EMBLAAEX03012366
Uniprot/SPTREMBLE2R071, E2R071_CANLF

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