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C. lupus familiaris Gene: S100A4 - ENSCAFG00000017550 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000017550
NameS100A4
DescriptionS100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494]
OrganismCanis lupus familiaris (dog)
Synonym(s)18a2, 42a, capl, fsp1, mts1, p9ka, pel98
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
102
  • 102
99.55
  • 99.55
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
184
  • 184
  • 1.42e3
99.18
  • 99.18
  • 93.64
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
190
  • 190
  • 2.48e3
99.15
  • 99.15
  • 88.92
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
205
  • 205
  • 417
99.09
  • 99.09
  • 98.14
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
390
  • 390
  • 2.30e3
98.26
  • 98.26
  • 89.73
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
427
  • 427
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
486
  • 486
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
492
  • 492
  • 3.98e3
97.80
  • 97.80
  • 82.23
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
506
  • 506
  • 858
97.74
  • 97.74
  • 96.17
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
581
  • 581
  • 1.17e4
97.41
  • 97.41
  • 47.60
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
612
  • 612
97.27
  • 97.27
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
651
  • 651
  • 2.96e3
  • 8.77e3
97.09
  • 97.09
  • 86.78
  • 60.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
731
  • 731
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
815
  • 815
  • 3.13e3
96.36
  • 96.36
  • 86.03
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
859
  • 859
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
929
  • 929
  • 1.08e3
  • 1.70e3
95.85
  • 95.85
  • 95.18
  • 92.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
992
  • 992
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.19e3
  • 1.19e3
94.67
  • 94.67
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.57e3
  • 1.57e3
  • 5.45e3
92.99
  • 92.99
  • 75.64
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.88e3
  • 1.88e3
  • 8.04e3
  • 8.62e3
91.60
  • 91.60
  • 64.07
  • 61.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
2.07e3
  • 2.07e3
90.76
  • 90.76
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
2.15e3
  • 2.15e3
90.39
  • 90.39
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
2.33e3
  • 2.33e3
89.60
  • 89.60
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
89.09
  • 89.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.75e3
  • 2.75e3
  • 1.03e4
87.72
  • 87.72
  • 54.12
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
3.05e3
  • 3.05e3
86.38
  • 86.38
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.22e3
  • 3.22e3
  • 5.67e3
85.60
  • 85.60
  • 74.66
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.39e3
  • 3.39e3
  • 7.20e3
  • 8.48e3
  • 1.13e4
  • 1.13e4
84.84
  • 84.84
  • 67.81
  • 62.07
  • 49.54
  • 49.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
3.53e3
  • 3.53e3
84.22
  • 84.22
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
3.64e3
  • 3.64e3
83.74
  • 83.74
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
3.64e3
  • 3.64e3
83.72
  • 83.72
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
3.87e3
  • 3.87e3
82.70
  • 82.70
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
4.09e3
  • 4.09e3
81.70
  • 81.70
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.49e3
  • 4.49e3
  • 5.34e3
79.93
  • 79.93
  • 76.12
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.55e3
  • 4.55e3
79.66
  • 79.66
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
5.43e3
  • 5.43e3
75.73
  • 75.73
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.53e3
  • 5.53e3
  • 5.61e3
75.27
  • 75.27
  • 74.90
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
5.53e3
  • 5.53e3
75.27
  • 75.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
6.01e3
  • 6.01e3
  • 1.04e4
73.14
  • 73.14
  • 53.38
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
6.03e3
  • 6.03e3
73.03
  • 73.03
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
  • 8.91e3
73.02
  • 73.02
  • 60.14
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
6.15e3
  • 6.15e3
72.51
  • 72.51
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
6.59e3
  • 6.59e3
70.53
  • 70.53
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
6.63e3
  • 6.63e3
70.36
  • 70.36
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
6.72e3
  • 6.72e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
7.02e3
  • 7.02e3
68.63
  • 68.63
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
7.69e3
  • 7.69e3
65.63
  • 65.63
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.36e3
  • 8.36e3
  • 1.19e4
62.60
  • 62.60
  • 46.97
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
8.63e3
  • 8.63e3
61.43
  • 61.43
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
8.78e3
  • 8.78e3
60.72
  • 60.72
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
9.82e3
  • 9.82e3
56.08
  • 56.08
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
51.01
  • 51.01
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.98
  • 48.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000017550.

Cross-references

EnsemblENSCAFG00000017550 (S100A4)
HGNCHGNC:10494 (S100A4)
EMBLAB031064
Uniprot/SWISSPROTQ9TV56, S10A4_CANLF

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