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C. lupus familiaris Gene: LRRC49 - ENSCAFG00000017623 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000017623
NameLRRC49
Descriptionleucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
OrganismCanis lupus familiaris (dog)
Synonym(s)flj20156
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.61e3
  • 1.61e3
  • 3.00e3
92.79
  • 92.79
  • 86.61
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
2.56e3
  • 2.56e3
88.57
  • 88.57
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
2.89e3
  • 2.89e3
87.09
  • 87.09
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
4.64e3
  • 4.64e3
79.28
  • 79.28
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.65e3
  • 4.65e3
79.23
  • 79.23
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.67e3
  • 4.67e3
79.13
  • 79.13
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.79e3
  • 4.79e3
  • 6.23e3
78.57
  • 78.57
  • 72.13
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.97e3
  • 4.97e3
77.79
  • 77.79
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
5.31e3
  • 5.31e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
5.37e3
  • 5.37e3
75.99
  • 75.99
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
6.54e3
  • 6.54e3
70.76
  • 70.76
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
7.21e3
  • 7.21e3
67.76
  • 67.76
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.91e3
  • 8.91e3
  • 1.35e4
60.18
  • 60.18
  • 39.63
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.91e3
  • 8.91e3
  • 1.05e4
  • 1.33e4
60.14
  • 60.14
  • 53.11
  • 40.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.17e3
  • 9.17e3
  • 1.16e4
58.99
  • 58.99
  • 48.16
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
9.42e3
  • 9.42e3
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.52e3
  • 9.52e3
  • 9.60e3
57.43
  • 57.43
  • 57.07
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
9.66e3
  • 9.66e3
56.80
  • 56.80
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.83e3
  • 9.83e3
  • 1.22e4
56.03
  • 56.03
  • 45.57
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.86e3
  • 9.86e3
  • 1.20e4
55.91
  • 55.91
  • 46.30
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
9.96e3
  • 9.96e3
55.46
  • 55.46
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
54.75
  • 54.75
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.27e4
54.38
  • 54.38
  • 43.01
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.35e4
53.17
  • 53.17
  • 39.64
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.12e4
  • 1.21e4
52.86
  • 52.86
  • 49.76
  • 46.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.10e4
52.78
  • 52.78
  • 50.81
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
52.65
  • 52.65
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.59
  • 52.59
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
52.49
  • 52.49
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
52.35
  • 52.35
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
51.51
  • 51.51
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.81
  • 50.81
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.64
  • 50.64
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
  • 1.51e4
50.22
  • 50.22
  • 32.32
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
49.04
  • 49.04
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
  • 1.16e4
48.90
  • 48.90
  • 47.96
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.46
  • 48.46
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.03
  • 48.03
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
47.40
  • 47.40
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
  • 1.47e4
46.88
  • 46.88
  • 34.14
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
46.80
  • 46.80
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.28e4
46.55
  • 46.55
  • 42.55
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
44.20
  • 44.20
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
42.96
  • 42.96
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
  • 1.40e4
  • 1.49e4
42.61
  • 42.61
  • 37.44
  • 33.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
42.38
  • 42.38
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.35
  • 42.35
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
41.02
  • 41.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.37e4
  • 1.47e4
  • 1.51e4
  • 1.68e4
39.43
  • 39.43
  • 38.74
  • 34.46
  • 32.27
  • 24.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
38.50
  • 38.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000017623.

Cross-references

EnsemblENSCAFG00000017623 (LRRC49)
HGNCHGNC:25965 (LRRC49)
EMBLAAEX03016266
Uniprot/SPTREMBLE2RID2, E2RID2_CANLF, J9NY11, J9NY11_CANLF

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