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C. lupus familiaris Gene: SYT4 - ENSCAFG00000017681 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000017681
NameSYT4
Descriptionsynaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
OrganismCanis lupus familiaris (dog)
Synonym(s)hst1192, kiaa1342
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
352
  • 352
  • 460
98.43
  • 98.43
  • 97.95
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
885
  • 885
  • 1.13e3
96.05
  • 96.05
  • 94.95
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
917
  • 917
95.90
  • 95.90
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.34e3
  • 1.34e3
94.00
  • 94.00
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.36e3
  • 1.36e3
93.91
  • 93.91
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.74e3
  • 1.74e3
92.21
  • 92.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.78e3
  • 1.78e3
  • 1.16e4
92.05
  • 92.05
  • 48.18
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
3.19e3
  • 3.19e3
85.72
  • 85.72
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
3.60e3
  • 3.60e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
4.85e3
  • 4.85e3
78.33
  • 78.33
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
4.90e3
  • 4.90e3
78.09
  • 78.09
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
6.91e3
  • 6.91e3
69.11
  • 69.11
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.01e3
  • 7.01e3
  • 1.26e4
68.64
  • 68.64
  • 43.46
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
  • 1.65e4
49.35
  • 49.35
  • 26.14
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
45.10
  • 45.10
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.30e4
  • 1.32e4
43.96
  • 43.96
  • 41.94
  • 41.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.38e4
43.13
  • 43.13
  • 38.25
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
39.90
  • 39.90
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.48e4
37.54
  • 37.54
  • 34.03
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
36.75
  • 36.75
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
  • 1.47e4
36.50
  • 36.50
  • 34.35
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.74e4
35.48
  • 35.48
  • 21.98
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
34.98
  • 34.98
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.49e4
  • 1.49e4
  • 1.60e4
33.18
  • 33.18
  • 28.59
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
32.96
  • 32.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.89e4
26.95
  • 26.95
  • 15.44
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
25.93
  • 25.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000017681.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000017681.

Cross-references

EnsemblENSCAFG00000017681 (SYT4)
HGNCHGNC:11512 (SYT4)
EMBLAAEX03005386
Uniprot/SPTREMBLF1PH85, F1PH85_CANLF

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