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C. lupus familiaris Gene: HNF1B - ENSCAFG00000018150 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000018150
NameHNF1B
DescriptionHNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
OrganismCanis lupus familiaris (dog)
Synonym(s)hnf1beta, lfb3, mody5, tcf2, vhnf1
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.48e3
  • 2.48e3
88.93
  • 88.93
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.68e3
  • 2.68e3
  • 4.15e3
  • 4.81e3
88.04
  • 88.04
  • 81.46
  • 78.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
2.68e3
  • 2.68e3
88.01
  • 88.01
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.71e3
  • 2.71e3
  • 3.85e3
87.90
  • 87.90
  • 82.80
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
3.73e3
  • 3.73e3
83.32
  • 83.32
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
3.82e3
  • 3.82e3
82.93
  • 82.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.74e3
  • 4.74e3
  • 1.81e4
78.81
  • 78.81
  • 18.88
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.58e3
  • 5.58e3
  • 1.30e4
75.05
  • 75.05
  • 41.86
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
6.57e3
  • 6.57e3
70.62
  • 70.62
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
7.28e3
  • 7.28e3
  • 1.46e4
67.45
  • 67.45
  • 34.54
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.64e3
  • 7.64e3
  • 7.65e3
  • 8.30e3
  • 1.00e4
  • 1.12e4
65.82
  • 65.82
  • 65.77
  • 62.88
  • 55.23
  • 49.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
8.15e3
  • 8.15e3
  • 1.30e4
63.55
  • 63.55
  • 41.67
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
9.02e3
  • 9.02e3
  • 1.07e4
  • 1.10e4
59.68
  • 59.68
  • 52.29
  • 50.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
9.28e3
  • 9.28e3
58.50
  • 58.50
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
53.41
  • 53.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
45.72
  • 45.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.53
  • 37.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
  • 2.01e4
34.61
  • 34.61
  • 10.27
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.80
  • 32.80
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
31.34
  • 31.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000018150.

Cross-references

EnsemblENSCAFG00000018150 (HNF1B)
HGNCHGNC:11630 (HNF1B)
EMBLAAEX03006616
Uniprot/SPTREMBLE2RAC2, E2RAC2_CANLF

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