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C. lupus familiaris Gene: ABCC6 - ENSCAFG00000018197 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000018197
NameABCC6
DescriptionATP binding cassette subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:57]
OrganismCanis lupus familiaris (dog)
Synonym(s)ara, est349056, mlp1, mrp6, pxe, urg7
Orthologs(s)15 orthologs
Paralog(s)27 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.04e3
  • 1.04e3
  • 1.40e3
  • 1.42e3
  • 1.87e3
  • 4.83e3
95.37
  • 95.37
  • 93.77
  • 93.64
  • 91.63
  • 78.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
5.21e3
  • 5.21e3
76.72
  • 76.72
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
5.56e3
  • 5.56e3
  • 1.33e4
75.14
  • 75.14
  • 40.41
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.29e3
  • 6.29e3
71.86
  • 71.86
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.53e3
  • 6.53e3
  • 1.76e4
70.81
  • 70.81
  • 21.29
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.62e3
  • 8.62e3
  • 1.33e4
61.44
  • 61.44
  • 40.54
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.68e3
  • 9.68e3
56.72
  • 56.72
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
9.99e3
  • 9.99e3
55.32
  • 55.32
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
54.26
  • 54.26
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
53.49
  • 53.49
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.10e4
  • 1.16e4
53.23
  • 53.23
  • 50.73
  • 48.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.45
  • 48.45
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.32
  • 48.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.73e4
47.24
  • 47.24
  • 22.74
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.76
  • 41.76
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.65e4
41.68
  • 41.68
  • 26.28
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
  • 1.45e4
  • 1.48e4
40.60
  • 40.60
  • 35.15
  • 33.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.46e4
40.18
  • 40.18
  • 34.86
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.82
  • 38.82
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.54
  • 37.54
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.26
  • 37.26
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
37.17
  • 37.17
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
37.07
  • 37.07
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
35.46
  • 35.46
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
34.09
  • 34.09
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
  • 1.50e4
33.90
  • 33.90
  • 33.05
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
33.57
  • 33.57
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
  • 1.65e4
33.44
  • 33.44
  • 26.31
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
  • 1.64e4
32.42
  • 32.42
  • 26.88
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.65e4
32.02
  • 32.02
  • 26.28
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
31.51
  • 31.51
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
27.50
  • 27.50
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
26.75
  • 26.75
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
  • 1.66e4
26.08
  • 26.08
  • 25.64
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.66e4
  • 1.66e4
25.64
  • 25.64
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
25.38
  • 25.38
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
25.35
  • 25.35
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
24.96
  • 24.96
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.72e4
  • 1.72e4
23.05
  • 23.05
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
22.75
  • 22.75
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
20.79
  • 20.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000018197.

Paralogs (same species)

Cross-references

EnsemblENSCAFG00000018197 (ABCC6)
HGNCHGNC:57 (ABCC6)
EMBLAAEX03004493
Uniprot/SPTREMBLF1PB44, F1PB44_CANLF

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