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C. lupus familiaris Gene: MYOM1 - ENSCAFG00000018478 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000018478
NameMYOM1
Descriptionmyomesin 1 [Source:HGNC Symbol;Acc:HGNC:7613]
OrganismCanis lupus familiaris (dog)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
173
  • 173
99.23
  • 99.23
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
472
  • 472
  • 825
97.90
  • 97.90
  • 96.31
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
497
  • 497
  • 589
97.78
  • 97.78
  • 97.37
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
504
  • 504
  • 632
97.75
  • 97.75
  • 97.18
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
525
  • 525
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
566
  • 566
  • 767
97.48
  • 97.48
  • 96.57
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
578
  • 578
97.42
  • 97.42
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
663
  • 663
97.04
  • 97.04
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
764
  • 764
96.59
  • 96.59
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
826
  • 826
96.31
  • 96.31
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.43e3
  • 1.43e3
93.62
  • 93.62
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
2.10e3
  • 2.10e3
  • 7.94e3
90.63
  • 90.63
  • 64.51
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
2.83e3
  • 2.83e3
  • 6.84e3
87.34
  • 87.34
  • 69.41
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.04e3
  • 3.04e3
  • 6.35e3
86.41
  • 86.41
  • 71.62
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.67e3
  • 3.67e3
  • 1.51e4
83.59
  • 83.59
  • 32.46
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.29e3
  • 4.29e3
80.81
  • 80.81
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.31e3
  • 7.31e3
  • 1.01e4
  • 1.35e4
67.33
  • 67.33
  • 55.06
  • 39.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
7.47e3
  • 7.47e3
66.60
  • 66.60
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.86e3
  • 7.86e3
  • 1.01e4
64.85
  • 64.85
  • 54.64
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.94e3
  • 7.94e3
  • 8.47e3
64.51
  • 64.51
  • 62.13
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
  • 1.44e4
58.62
  • 58.62
  • 35.41
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
9.58e3
  • 9.58e3
  • 1.17e4
  • 1.35e4
57.17
  • 57.17
  • 47.60
  • 39.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.30
  • 54.30
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
50.13
  • 50.13
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.13e4
  • 1.13e4
  • 1.38e4
49.61
  • 49.61
  • 38.38
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.28e4
  • 1.37e4
  • 1.40e4
  • 1.42e4
48.73
  • 48.73
  • 42.75
  • 38.53
  • 37.47
  • 36.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.35
  • 48.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.62
  • 47.62
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.18e4
  • 1.18e4
47.34
  • 47.34
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.42
  • 46.42
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
45.35
  • 45.35
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
44.16
  • 44.16
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.34e4
  • 1.46e4
43.26
  • 43.26
  • 40.02
  • 34.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.40e4
42.81
  • 42.81
  • 37.41
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.76
  • 41.76
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
41.71
  • 41.71
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
  • 1.38e4
41.51
  • 41.51
  • 38.50
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
40.66
  • 40.66
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.49
  • 40.49
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
40.35
  • 40.35
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.56
  • 39.56
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.87
  • 38.87
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.70
  • 38.70
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
38.22
  • 38.22
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
37.96
  • 37.96
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.90
  • 37.90
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
37.22
  • 37.22
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.73
  • 36.73
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
36.56
  • 36.56
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
36.53
  • 36.53
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
35.27
  • 35.27
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
34.15
  • 34.15
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.49e4
  • 1.49e4
  • 1.51e4
33.32
  • 33.32
  • 32.60
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000018478.

Cross-references

EnsemblENSCAFG00000018478 (MYOM1)
HGNCHGNC:7613 (MYOM1)
EMBLAAEX03005473
Uniprot/SPTREMBLE2RNN6, E2RNN6_CANLF, J9NV69, J9NV69_CANLF

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