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C. lupus familiaris Gene: SH2D3A - ENSCAFG00000018602 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000018602
NameSH2D3A
DescriptionSH2 domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16885]
OrganismCanis lupus familiaris (dog)
Synonym(s)nsp1
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
3.33e3
  • 3.33e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
3.85e3
  • 3.85e3
82.80
  • 82.80
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
4.06e3
  • 4.06e3
81.83
  • 81.83
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
4.52e3
  • 4.52e3
  • 5.91e3
  • 1.47e4
79.79
  • 79.79
  • 73.58
  • 34.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
4.74e3
  • 4.74e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
5.11e3
  • 5.11e3
77.14
  • 77.14
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
76.07
  • 76.07
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.36e3
  • 5.36e3
76.05
  • 76.05
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
5.43e3
  • 5.43e3
  • 1.19e4
75.73
  • 75.73
  • 47.00
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.90e3
  • 5.90e3
  • 1.32e4
73.63
  • 73.63
  • 40.96
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.98e3
  • 5.98e3
  • 6.61e3
  • 8.01e3
73.28
  • 73.28
  • 70.44
  • 64.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
6.11e3
  • 6.11e3
72.68
  • 72.68
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
71.54
  • 71.54
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
6.42e3
  • 6.42e3
  • 1.29e4
71.30
  • 71.30
  • 42.11
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
7.32e3
  • 7.32e3
67.28
  • 67.28
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
7.42e3
  • 7.42e3
66.84
  • 66.84
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
7.48e3
  • 7.48e3
66.58
  • 66.58
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.48e3
  • 7.48e3
  • 8.30e3
66.54
  • 66.54
  • 62.88
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
7.51e3
  • 7.51e3
66.43
  • 66.43
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.87e3
  • 7.87e3
  • 1.00e4
64.81
  • 64.81
  • 55.26
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
7.89e3
  • 7.89e3
64.73
  • 64.73
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.19e3
  • 8.19e3
63.40
  • 63.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
8.81e3
  • 8.81e3
  • 1.04e4
  • 1.11e4
  • 1.33e4
  • 1.38e4
60.59
  • 60.59
  • 53.71
  • 50.28
  • 40.59
  • 38.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.79e3
  • 9.79e3
  • 9.87e3
56.22
  • 56.22
  • 55.89
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.20
  • 55.20
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.01e4
  • 1.01e4
  • 1.31e4
54.68
  • 54.68
  • 41.41
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
  • 1.08e4
53.38
  • 53.38
  • 51.59
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.26
  • 51.26
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
51.19
  • 51.19
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
47.97
  • 47.97
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
46.47
  • 46.47
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
  • 1.24e4
46.38
  • 46.38
  • 44.50
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.89
  • 45.89
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.79
  • 45.79
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
  • 1.31e4
43.32
  • 43.32
  • 41.54
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
42.57
  • 42.57
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
  • 1.35e4
40.61
  • 40.61
  • 39.59
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.33e4
  • 1.33e4
  • 1.62e4
40.37
  • 40.37
  • 27.75
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.20
  • 37.20
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
37.15
  • 37.15
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
  • 1.46e4
  • 1.52e4
37.10
  • 37.10
  • 34.90
  • 31.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
36.18
  • 36.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
32.10
  • 32.10
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
26.30
  • 26.30
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.76e4
  • 1.76e4
21.44
  • 21.44
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.80e4
  • 1.80e4
19.70
  • 19.70
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.81e4
  • 1.81e4
18.88
  • 18.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000018602.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000018602.

Cross-references

EnsemblENSCAFG00000018602 (SH2D3A)
HGNCHGNC:16885 (SH2D3A)
EMBLAAEX03012488
Uniprot/SPTREMBLE2RGR2, E2RGR2_CANLF, F1PUA5, F1PUA5_CANLF

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