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C. lupus familiaris Gene: ACTRT1 - ENSCAFG00000018658 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000018658
NameACTRT1
Descriptionactin-related protein T1 [Source:HGNC Symbol;Acc:HGNC:24027]
OrganismCanis lupus familiaris (dog)
Synonym(s)aip1, arip1, arp-t1, kiaa0705
Orthologs(s)12 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
6.71e3
  • 6.71e3
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
53.84
  • 53.84
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.32e4
  • 1.32e4
  • 1.45e4
41.05
  • 41.05
  • 35.10
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
36.76
  • 36.76
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
35.22
  • 35.22
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.64
  • 31.64
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.57e4
31.17
  • 31.17
  • 29.94
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.55e4
  • 1.55e4
  • 1.60e4
30.47
  • 30.47
  • 28.43
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 2.08e4
27.12
  • 27.12
  • 7.08
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
26.29
  • 26.29
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
20.86
  • 20.86
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
18.31
  • 18.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.90e4
  • 1.90e4
15.07
  • 15.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Amniota1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000018658.

Cross-references

EnsemblENSCAFG00000018658 (ACTRT1)
HGNCHGNC:24027 (ACTRT1)
EMBLAAEX03026881
Uniprot/SPTREMBLE2QWP5, E2QWP5_CANLF

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