We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

C. lupus familiaris Gene: SLC13A2 - ENSCAFG00000018692 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000018692
NameSLC13A2
Descriptionsolute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:HGNC Symbol;Acc:HGNC:10917]
OrganismCanis lupus familiaris (dog)
Synonym(s)nadc-1
Orthologs(s)33 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.14e3
  • 1.14e3
94.91
  • 94.91
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.39e3
  • 1.39e3
  • 1.30e4
93.81
  • 93.81
  • 41.89
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
93.45
  • 93.45
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.64e3
  • 1.64e3
  • 1.32e4
92.66
  • 92.66
  • 40.87
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
90.51
  • 90.51
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
2.76e3
  • 2.76e3
87.67
  • 87.67
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
3.06e3
  • 3.06e3
86.32
  • 86.32
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.10e3
  • 3.10e3
  • 1.53e4
86.14
  • 86.14
  • 31.61
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
9.02e3
  • 9.02e3
59.67
  • 59.67
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
  • 1.41e4
46.35
  • 46.35
  • 36.89
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.46
  • 41.46
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.54
  • 38.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.51e4
  • 1.63e4
  • 1.67e4
36.08
  • 36.08
  • 32.69
  • 27.13
  • 25.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.71e4
35.49
  • 35.49
  • 23.60
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
  • 1.63e4
32.95
  • 32.95
  • 26.98
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.75
  • 30.75
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.22
  • 30.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.92
  • 29.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.70e4
29.52
  • 29.52
  • 23.99
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
29.41
  • 29.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 2.12e4
26.84
  • 26.84
  • 5.13
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
26.74
  • 26.74
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
20.34
  • 20.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Bilateria24 species33 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000018692.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eumetazoa2 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000018692.

Cross-references

EnsemblENSCAFG00000018692 (SLC13A2)
HGNCHGNC:10917 (SLC13A2)
Uniprot/SPTREMBLE2R656, E2R656_CANLF

Do not show this banner again