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C. lupus familiaris Gene: ZIC3 - ENSCAFG00000018979 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000018979
NameZIC3
DescriptionZic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
OrganismCanis lupus familiaris (dog)
Synonym(s)htx, htx1, znf203
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.79e3
  • 8.79e3
60.68
  • 60.68
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.72
  • 48.72
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
44.41
  • 44.41
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
43.76
  • 43.76
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
42.92
  • 42.92
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.32e4
42.61
  • 42.61
  • 40.89
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
41.92
  • 41.92
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.84
  • 39.84
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.24
  • 39.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
36.06
  • 36.06
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
35.94
  • 35.94
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
  • 2.00e4
34.68
  • 34.68
  • 10.61
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
34.32
  • 34.32
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.73
  • 33.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.59
  • 33.59
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
31.00
  • 31.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.55e4
  • 1.61e4
  • 1.75e4
31.00
  • 31.00
  • 30.48
  • 28.17
  • 21.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
30.99
  • 30.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
26.31
  • 26.31
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 2.14e4
20.64
  • 20.64
  • 4.27
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000018979.

Cross-references

EnsemblENSCAFG00000018979 (ZIC3)
HGNCHGNC:12874 (ZIC3)
EMBLAAEX03026958
Uniprot/SPTREMBLE2R969, E2R969_CANLF, J9P982, J9P982_CANLF

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