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C. lupus familiaris Gene: NLRC3 - ENSCAFG00000019271 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000019271
NameNLRC3
DescriptionNLR family, CARD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29889]
OrganismCanis lupus familiaris (dog)
Synonym(s)clr16.2, flj00348, nod3
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000104life cycle
4.80e3
  • 4.80e3
78.53
  • 78.53
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.31e3
  • 6.31e3
71.77
  • 71.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
7.57e3
  • 7.57e3
  • 8.34e3
  • 1.31e4
66.14
  • 66.14
  • 62.73
  • 41.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
8.28e3
  • 8.28e3
  • 1.45e4
62.96
  • 62.96
  • 35.01
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.68e3
  • 8.68e3
  • 1.00e4
61.20
  • 61.20
  • 55.12
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
  • 1.49e4
48.41
  • 48.41
  • 33.45
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
43.15
  • 43.15
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.91
  • 41.91
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
40.62
  • 40.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
  • 1.43e4
  • 1.45e4
  • 1.51e4
39.16
  • 39.16
  • 35.90
  • 35.16
  • 32.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
37.82
  • 37.82
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.42e4
37.21
  • 37.21
  • 36.41
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
  • 1.44e4
35.74
  • 35.74
  • 35.60
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
34.21
  • 34.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.63
  • 29.63
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
28.26
  • 28.26
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
28.06
  • 28.06
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
  • 1.64e4
26.90
  • 26.90
  • 26.86
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
26.12
  • 26.12
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
25.69
  • 25.69
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
25.47
  • 25.47
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.76e4
  • 1.76e4
21.31
  • 21.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
20.62
  • 20.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000019271.

Cross-references

EnsemblENSCAFG00000019271 (NLRC3)
HGNCHGNC:29889 (NLRC3)
EMBLAAEX03004591
Uniprot/SPTREMBLF1PXP2, F1PXP2_CANLF

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