We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

C. lupus familiaris Gene: PERM1 - ENSCAFG00000019352 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000019352
NamePERM1
DescriptionPPARGC1 and ESRR induced regulator, muscle 1 [Source:HGNC Symbol;Acc:HGNC:28208]
OrganismCanis lupus familiaris (dog)
Synonym(s)c1orf170, mgc13275, perm1, rp11-54o7.8
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
774
  • 774
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.05e3
  • 1.05e3
95.32
  • 95.32
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.23e3
  • 1.23e3
  • 1.85e3
94.49
  • 94.49
  • 91.73
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.53e3
  • 1.53e3
  • 2.00e3
93.18
  • 93.18
  • 91.04
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.59e3
  • 1.59e3
  • 1.19e4
92.88
  • 92.88
  • 46.86
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
2.81e3
  • 2.81e3
87.45
  • 87.45
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.10e3
  • 3.10e3
  • 4.11e3
86.15
  • 86.15
  • 81.61
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
4.71e3
  • 4.71e3
78.92
  • 78.92
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
7.77e3
  • 7.77e3
65.28
  • 65.28
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.91e3
  • 7.91e3
  • 1.73e4
64.61
  • 64.61
  • 22.80
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.42e3
  • 8.42e3
  • 1.43e4
62.33
  • 62.33
  • 35.86
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
9.26e3
  • 9.26e3
58.61
  • 58.61
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
9.28e3
  • 9.28e3
58.50
  • 58.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.42e3
  • 9.42e3
  • 1.53e4
57.90
  • 57.90
  • 31.62
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.61
  • 48.61
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
  • 1.32e4
46.42
  • 46.42
  • 41.00
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
  • 1.44e4
43.96
  • 43.96
  • 35.52
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
43.44
  • 43.44
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.28e4
  • 1.28e4
  • 1.54e4
42.91
  • 42.91
  • 30.93
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
40.78
  • 40.78
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
39.47
  • 39.47
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
  • 1.58e4
39.37
  • 39.37
  • 29.13
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
36.98
  • 36.98
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
  • 1.56e4
  • 1.58e4
34.76
  • 34.76
  • 30.12
  • 29.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
  • 1.56e4
34.50
  • 34.50
  • 30.23
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.08
  • 34.08
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.90
  • 33.90
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.67
  • 33.67
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.52
  • 32.52
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.55e4
  • 1.65e4
  • 1.73e4
31.81
  • 31.81
  • 30.89
  • 25.99
  • 22.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.57e4
  • 1.74e4
31.53
  • 31.53
  • 29.67
  • 22.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.49
  • 31.49
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.43
  • 31.43
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.39
  • 31.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
  • 1.58e4
  • 1.71e4
30.79
  • 30.79
  • 29.44
  • 23.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.78
  • 30.78
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.57e4
  • 1.57e4
29.67
  • 29.67
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
28.81
  • 28.81
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
28.20
  • 28.20
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.62e4
  • 1.62e4
27.73
  • 27.73
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
27.28
  • 27.28
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.67e4
  • 1.67e4
25.53
  • 25.53
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
25.10
  • 25.10
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
1.69e4
  • 1.69e4
24.44
  • 24.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
24.22
  • 24.22
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
20.70
  • 20.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000019352.

Cross-references

EnsemblENSCAFG00000019352 (PERM1)
HGNCHGNC:28208 (PERM1)
EMBLAAEX03003836
Uniprot/SPTREMBLE2R7Q7, E2R7Q7_CANLF

Do not show this banner again