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C. lupus familiaris Gene: RER1 - ENSCAFG00000019395 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000019395
NameRER1
Descriptionretention in endoplasmic reticulum sorting receptor 1 [Source:HGNC Symbol;Acc:HGNC:30309]
OrganismCanis lupus familiaris (dog)
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
458
  • 458
97.96
  • 97.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
528
  • 528
  • 596
  • 792
  • 871
  • 985
97.65
  • 97.65
  • 97.34
  • 96.46
  • 96.11
  • 95.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
534
  • 534
97.62
  • 97.62
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
543
  • 543
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
553
  • 553
  • 878
  • 932
97.53
  • 97.53
  • 96.08
  • 95.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
575
  • 575
  • 595
  • 620
97.43
  • 97.43
  • 97.34
  • 97.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
582
  • 582
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
585
  • 585
  • 921
97.39
  • 97.39
  • 95.89
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
586
  • 586
97.38
  • 97.38
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
590
  • 590
  • 801
97.37
  • 97.37
  • 96.42
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
597
  • 597
97.33
  • 97.33
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
607
  • 607
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
626
  • 626
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
647
  • 647
  • 682
97.11
  • 97.11
  • 96.95
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
647
  • 647
  • 695
97.11
  • 97.11
  • 96.90
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
666
  • 666
97.03
  • 97.03
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
669
  • 669
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
679
  • 679
  • 686
96.97
  • 96.97
  • 96.94
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
690
  • 690
96.92
  • 96.92
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
703
  • 703
  • 898
96.86
  • 96.86
  • 95.99
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
705
  • 705
  • 1.00e3
96.85
  • 96.85
  • 95.51
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
709
  • 709
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
735
  • 735
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
741
  • 741
  • 2.18e3
96.69
  • 96.69
  • 90.26
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
743
  • 743
  • 930
96.68
  • 96.68
  • 95.84
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
797
  • 797
96.44
  • 96.44
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
804
  • 804
96.41
  • 96.41
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
805
  • 805
96.40
  • 96.40
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
815
  • 815
  • 5.01e3
96.36
  • 96.36
  • 77.58
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
826
  • 826
96.31
  • 96.31
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
826
  • 826
96.31
  • 96.31
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
826
  • 826
  • 833
  • 1.10e3
96.31
  • 96.31
  • 96.28
  • 95.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
830
  • 830
96.29
  • 96.29
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
847
  • 847
96.22
  • 96.22
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
855
  • 855
  • 893
96.18
  • 96.18
  • 96.01
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
861
  • 861
  • 2.99e3
96.15
  • 96.15
  • 86.63
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
887
  • 887
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
890
  • 890
96.02
  • 96.02
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
975
  • 975
95.65
  • 95.65
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
980
  • 980
95.62
  • 95.62
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
998
  • 998
  • 1.33e3
95.54
  • 95.54
  • 94.07
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.05e3
  • 1.05e3
95.30
  • 95.30
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.09e3
  • 1.09e3
95.15
  • 95.15
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.09e3
  • 1.09e3
95.14
  • 95.14
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.17e3
  • 1.17e3
94.79
  • 94.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.29e3
  • 1.29e3
94.22
  • 94.22
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.30e3
  • 1.30e3
94.19
  • 94.19
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.32e3
  • 1.32e3
94.08
  • 94.08
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
1.35e3
  • 1.35e3
93.95
  • 93.95
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.38e3
  • 1.38e3
93.85
  • 93.85
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.47e3
  • 1.47e3
  • 1.91e3
93.42
  • 93.42
  • 91.49
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.49e3
  • 1.49e3
93.34
  • 93.34
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.51e3
  • 1.51e3
93.27
  • 93.27
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.51e3
  • 1.51e3
93.25
  • 93.25
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.56e3
  • 1.56e3
93.04
  • 93.04
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
2.01e3
  • 2.01e3
91.01
  • 91.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000019395.

Cross-references

EnsemblENSCAFG00000019395 (RER1)
HGNCHGNC:30309 (RER1)
EMBLAAEX03003866
Uniprot/SPTREMBLF6XF58, F6XF58_CANLF

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