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C. lupus familiaris Gene: ACTRT2 - ENSCAFG00000019471 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000019471
NameACTRT2
Descriptionactin related protein T2 [Source:HGNC Symbol;Acc:HGNC:24026]
OrganismCanis lupus familiaris (dog)
Synonym(s)arp-t2, arpm2, flj25424
Orthologs(s)14 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
2.67e3
  • 2.67e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
47.25
  • 47.25
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
40.78
  • 40.78
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.62
  • 40.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.27
  • 39.27
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
36.16
  • 36.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.56
  • 32.56
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.67
  • 29.67
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
28.72
  • 28.72
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
19.78
  • 19.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000019471.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Amniota1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000019471.

Cross-references

EnsemblENSCAFG00000019471 (ACTRT2)
HGNCHGNC:24026 (ACTRT2)
EMBLAAEX03003873
Uniprot/SPTREMBLE2QWY7, E2QWY7_CANLF

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