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C. lupus familiaris Gene: LRRC29 - ENSCAFG00000020372 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000020372
NameLRRC29
Descriptionleucine rich repeat containing 29 [Source:HGNC Symbol;Acc:HGNC:13605]
OrganismCanis lupus familiaris (dog)
Synonym(s)fbl9, fbxl9
Orthologs(s)8 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
46.07
  • 46.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.84
  • 43.84
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
41.56
  • 41.56
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
  • 1.34e4
41.53
  • 41.53
  • 39.96
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
40.88
  • 40.88
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.35
  • 40.35
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
39.91
  • 39.91
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
  • 1.46e4
39.67
  • 39.67
  • 34.54
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
39.28
  • 39.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.37e4
  • 1.37e4
  • 1.76e4
38.75
  • 38.75
  • 21.49
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
  • 1.50e4
  • 2.00e4
38.34
  • 38.34
  • 33.04
  • 10.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
37.30
  • 37.30
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
35.71
  • 35.71
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.45e4
  • 1.45e4
  • 1.50e4
35.29
  • 35.29
  • 32.70
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.45e4
  • 1.45e4
  • 1.50e4
  • 1.51e4
35.23
  • 35.23
  • 32.95
  • 32.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
  • 1.56e4
35.00
  • 35.00
  • 30.11
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
34.41
  • 34.41
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.26
  • 34.26
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.97
  • 33.97
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.83
  • 33.83
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
33.67
  • 33.67
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
33.57
  • 33.57
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.45
  • 33.45
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.49e4
  • 1.49e4
33.27
  • 33.27
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.50e4
  • 1.50e4
  • 1.73e4
33.08
  • 33.08
  • 22.52
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.90
  • 32.90
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.67
  • 32.67
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.49
  • 32.49
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
32.38
  • 32.38
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
  • 1.52e4
32.30
  • 32.30
  • 31.85
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
31.99
  • 31.99
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
31.84
  • 31.84
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.79
  • 31.79
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
  • 1.63e4
31.06
  • 31.06
  • 27.09
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
30.80
  • 30.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.64e4
  • 1.67e4
  • 1.71e4
30.78
  • 30.78
  • 26.89
  • 25.29
  • 23.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.55
  • 30.55
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.50
  • 30.50
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.39
  • 30.39
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.27
  • 30.27
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.20
  • 30.20
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.66e4
29.94
  • 29.94
  • 25.88
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.64e4
29.31
  • 29.31
  • 26.55
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
25.40
  • 25.40
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.74e4
  • 1.74e4
22.18
  • 22.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria5 species5 genesCompare expression
Mammalia6 species6 genesCompare expression
Amniota7 species7 genesCompare expression
Euteleostomi8 species8 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000020372.

Cross-references

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