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C. lupus familiaris Gene: HTR2C - ENSCAFG00000029120 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000029120
NameHTR2C
Description5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled [Source:HGNC Symbol;Acc:HGNC:5295]
OrganismCanis lupus familiaris (dog)
Synonym(s)5-ht-2c, 5-ht2c, 5-htr2c, 5htr2c, htr1c
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.08e3
  • 8.08e3
  • 1.77e4
63.85
  • 63.85
  • 20.87
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
8.62e3
  • 8.62e3
61.46
  • 61.46
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
8.80e3
  • 8.80e3
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
9.12e3
  • 9.12e3
59.24
  • 59.24
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
52.93
  • 52.93
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.51
  • 51.51
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.32
  • 48.32
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
45.15
  • 45.15
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
36.55
  • 36.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.50e4
  • 1.50e4
33.14
  • 33.14
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 2.00e4
31.85
  • 31.85
  • 10.61
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.73e4
31.59
  • 31.59
  • 22.44
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.51
  • 30.51
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
27.85
  • 27.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
  • 1.77e4
26.18
  • 26.18
  • 20.65
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
25.15
  • 25.15
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
  • 2.14e4
23.60
  • 23.60
  • 4.27
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000029120.

Cross-references

EnsemblENSCAFG00000029120 (HTR2C)
HGNCHGNC:5295 (HTR2C)
EMBLAAEX03026795, AAEX03026796
Uniprot/SPTREMBLJ9PBP0, J9PBP0_CANLF

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