C. lupus familiaris Gene: FANCF - ENSCAFG00000029498 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000029498
NameFANCF
DescriptionFanconi anemia complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
OrganismCanis lupus familiaris (dog)
Synonym(s)faf
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
6.76e3
  • 6.76e3
  • 1.05e4
  • 1.31e4
  • 1.54e4
  • 1.58e4
69.77
  • 69.77
  • 53.12
  • 41.59
  • 31.32
  • 29.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
7.01e3
  • 7.01e3
68.65
  • 68.65
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.47e3
  • 7.47e3
66.59
  • 66.59
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.96e3
  • 7.96e3
  • 1.83e4
64.42
  • 64.42
  • 18.33
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
8.67e3
  • 8.67e3
61.25
  • 61.25
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
8.79e3
  • 8.79e3
  • 1.73e4
60.69
  • 60.69
  • 22.59
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
9.65e3
  • 9.65e3
56.87
  • 56.87
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
53.82
  • 53.82
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
52.94
  • 52.94
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
52.10
  • 52.10
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
51.08
  • 51.08
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 2.00e4
49.10
  • 49.10
  • 10.61
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
39.29
  • 39.29
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
38.82
  • 38.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 2.12e4
38.77
  • 38.77
  • 5.13
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
36.37
  • 36.37
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
36.29
  • 36.29
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.43e4
  • 1.43e4
  • 1.86e4
35.95
  • 35.95
  • 17.02
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.80e4
35.70
  • 35.70
  • 19.51
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
34.54
  • 34.54
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
33.83
  • 33.83
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
33.45
  • 33.45
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
32.32
  • 32.32
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.11
  • 31.11
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.03
  • 30.03
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.83
  • 29.83
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.57e4
  • 1.57e4
29.69
  • 29.69
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
28.44
  • 28.44
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
28.40
  • 28.40
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.69e4
28.29
  • 28.29
  • 24.41
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.62e4
  • 1.62e4
27.45
  • 27.45
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
20.30
  • 20.30
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
20.17
  • 20.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000029498.

Cross-references

EnsemblENSCAFG00000029498 (FANCF)
HGNCHGNC:3587 (FANCF)
EMBLAAEX03013004, AAEX03013005
Uniprot/SPTREMBLJ9P3B2, J9P3B2_CANLF

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