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C. lupus familiaris Gene: SMIM11A - ENSCAFG00000030556 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000030556
NameSMIM11A
Descriptionsmall integral membrane protein 11A [Source:HGNC Symbol;Acc:HGNC:1293]
OrganismCanis lupus familiaris (dog)
Synonym(s)c21orf51, fam165b, smim11
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
540
  • 540
  • 5.12e3
97.59
  • 97.59
  • 77.13
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
558
  • 558
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
704
  • 704
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
770
  • 770
  • 1.79e3
96.56
  • 96.56
  • 91.99
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.23e3
  • 1.23e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.24e3
  • 1.24e3
94.45
  • 94.45
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
  • 2.85e3
94.44
  • 94.44
  • 87.28
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.34e3
  • 1.34e3
94.01
  • 94.01
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.35e3
  • 1.35e3
93.97
  • 93.97
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
93.43
  • 93.43
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.59e3
  • 1.59e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.72e3
  • 1.72e3
  • 2.53e3
92.30
  • 92.30
  • 88.71
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.82e3
  • 1.82e3
91.88
  • 91.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.85e3
  • 1.85e3
  • 5.93e3
91.75
  • 91.75
  • 73.48
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.85e3
  • 1.85e3
91.74
  • 91.74
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
1.88e3
  • 1.88e3
91.61
  • 91.61
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.93e3
  • 1.93e3
  • 2.56e3
  • 6.04e3
91.38
  • 91.38
  • 88.54
  • 73.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.97e3
  • 1.97e3
91.18
  • 91.18
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
2.00e3
  • 2.00e3
91.06
  • 91.06
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
90.84
  • 90.84
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
  • 7.49e3
90.75
  • 90.75
  • 66.51
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
  • 4.91e3
90.73
  • 90.73
  • 78.06
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
2.10e3
  • 2.10e3
90.62
  • 90.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.13e3
  • 2.13e3
  • 2.81e3
90.48
  • 90.48
  • 87.45
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.16e3
  • 2.16e3
  • 4.04e3
90.34
  • 90.34
  • 81.92
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 3.72e3
  • 9.91e3
90.18
  • 90.18
  • 83.35
  • 55.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
2.35e3
  • 2.35e3
89.51
  • 89.51
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
2.37e3
  • 2.37e3
89.41
  • 89.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
2.40e3
  • 2.40e3
89.25
  • 89.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.49e3
  • 2.49e3
  • 4.04e3
88.87
  • 88.87
  • 81.92
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
  • 5.67e3
  • 6.83e3
88.72
  • 88.72
  • 74.66
  • 69.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.65e3
  • 2.65e3
  • 5.31e3
88.14
  • 88.14
  • 76.27
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.67e3
  • 2.67e3
  • 4.42e3
88.08
  • 88.08
  • 80.22
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
2.73e3
  • 2.73e3
87.81
  • 87.81
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
2.73e3
  • 2.73e3
87.80
  • 87.80
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
2.79e3
  • 2.79e3
87.54
  • 87.54
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
2.81e3
  • 2.81e3
87.44
  • 87.44
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
3.11e3
  • 3.11e3
86.11
  • 86.11
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
3.85e3
  • 3.85e3
82.81
  • 82.81
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
3.85e3
  • 3.85e3
82.77
  • 82.77
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
3.88e3
  • 3.88e3
82.63
  • 82.63
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
3.93e3
  • 3.93e3
82.42
  • 82.42
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.96e3
  • 3.96e3
  • 8.79e3
82.28
  • 82.28
  • 60.71
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.17e3
  • 4.17e3
81.37
  • 81.37
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
4.33e3
  • 4.33e3
80.63
  • 80.63
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
4.35e3
  • 4.35e3
80.55
  • 80.55
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
4.65e3
  • 4.65e3
79.21
  • 79.21
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
4.70e3
  • 4.70e3
78.99
  • 78.99
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.94e3
  • 4.94e3
  • 7.18e3
  • 8.97e3
  • 9.33e3
  • 2.08e4
77.93
  • 77.93
  • 67.91
  • 59.90
  • 58.28
  • 7.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
5.16e3
  • 5.16e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.58e3
  • 6.58e3
70.59
  • 70.59
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
9.77e3
  • 9.77e3
56.31
  • 56.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species6 genesCompare expression
Boreoeutheria12 species14 genesCompare expression
Mammalia13 species15 genesCompare expression
Amniota14 species16 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000030556.

Cross-references

EnsemblENSCAFG00000030556 (SMIM11A)
HGNCHGNC:1293 (SMIM11A)
EMBLAAEX03016506
Uniprot/SPTREMBLJ9NSI7, J9NSI7_CANLF

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