C. porcellus Gene: HAND2 - ENSCPOG00000001740 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000001740
NameHAND2
Descriptionheart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
OrganismCavia porcellus (guinea pig)
Synonym(s)bhlha26, dhand, hed, thing2
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.63e3
  • 1.63e3
91.73
  • 91.73
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
2.19e3
  • 2.19e3
  • 2.50e3
88.86
  • 88.86
  • 87.29
AEIR
  • AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
6.19e3
  • 6.19e3
68.49
  • 68.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
8.32e3
  • 8.32e3
57.64
  • 57.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
46.19
  • 46.19
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
43.44
  • 43.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
40.92
  • 40.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
36.62
  • 36.62
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
32.07
  • 32.07
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
19.73
  • 19.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000001740.

Cross-references

EnsemblENSCPOG00000001740 (HAND2)
HGNCHGNC:4808 (HAND2)
EMBLAAKN02036336
Uniprot/SPTREMBLH0UWX3, H0UWX3_CAVPO

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