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C. porcellus Gene: SPNS1 - ENSCPOG00000002005 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000002005
NameSPNS1
Descriptionspinster homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:HGNC:30621]
OrganismCavia porcellus (guinea pig)
Synonym(s)hspin1, lat, nrs, pp2030, spin1, spinl
Orthologs(s)26 orthologs
Paralog(s)26 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
2.51e3
  • 2.51e3
87.21
  • 87.21
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
2.59e3
  • 2.59e3
86.80
  • 86.80
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
3.03e3
  • 3.03e3
84.55
  • 84.55
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
3.33e3
  • 3.33e3
83.05
  • 83.05
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
3.33e3
  • 3.33e3
83.05
  • 83.05
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
3.57e3
  • 3.57e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
3.78e3
  • 3.78e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
4.36e3
  • 4.36e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.66e3
  • 4.66e3
76.29
  • 76.29
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
4.78e3
  • 4.78e3
  • 6.06e3
75.67
  • 75.67
  • 69.14
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
4.94e3
  • 4.94e3
74.84
  • 74.84
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
4.96e3
  • 4.96e3
74.72
  • 74.72
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
5.44e3
  • 5.44e3
72.29
  • 72.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
6.14e3
  • 6.14e3
68.71
  • 68.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species26 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000002005.

Paralogs (same species)

Cross-references

EnsemblENSCPOG00000002005 (SPNS1)
HGNCHGNC:30621 (SPNS1)
EMBLAAKN02007762
Uniprot/SPTREMBLH0UXJ0, H0UXJ0_CAVPO

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