C. porcellus Gene: PHF19 - ENSCPOG00000002245 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000002245
NamePHF19
DescriptionPHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]
OrganismCavia porcellus (guinea pig)
Synonym(s)dkfzp727g051, mtf2l1, pcl3, tdrd19b
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002084heart left ventricle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000068embryo stage
3.02e3
  • 3.02e3
  • 3.19e3
84.60
  • 84.60
  • 83.75
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
3.17e3
  • 3.17e3
83.85
  • 83.85
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
7.50e3
  • 7.50e3
61.81
  • 61.81
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
7.98e3
  • 7.98e3
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
8.42e3
  • 8.42e3
57.10
  • 57.10
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
9.24e3
  • 9.24e3
52.96
  • 52.96
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.26e3
  • 9.26e3
52.86
  • 52.86
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
9.40e3
  • 9.40e3
52.12
  • 52.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
9.57e3
  • 9.57e3
51.25
  • 51.25
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
44.17
  • 44.17
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
43.47
  • 43.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
41.82
  • 41.82
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
39.44
  • 39.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000002245.

Cross-references

EnsemblENSCPOG00000002245 (PHF19)
HGNCHGNC:24566 (PHF19)
EMBLAAKN02005198
Uniprot/SPTREMBLH0UY36, H0UY36_CAVPO

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