C. porcellus Gene: SEMA6B - ENSCPOG00000002693 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000002693
NameSEMA6B
Descriptionsema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B [Source:HGNC Symbol;Acc:HGNC:10739]
OrganismCavia porcellus (guinea pig)
Synonym(s)sem-sema-y, sema-vib, seman, semaz
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.00e3
  • 1.00e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
1.38e3
  • 1.38e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.50e3
  • 2.50e3
87.26
  • 87.26
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.90e3
  • 2.90e3
85.24
  • 85.24
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
  • 9.30e3
81.49
  • 81.49
  • 52.62
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
3.94e3
  • 3.94e3
79.93
  • 79.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
4.04e3
  • 4.04e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.23e3
  • 4.23e3
78.48
  • 78.48
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
4.81e3
  • 4.81e3
75.53
  • 75.53
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
5.03e3
  • 5.03e3
74.40
  • 74.40
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
5.80e3
  • 5.80e3
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
6.78e3
  • 6.78e3
65.45
  • 65.45
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
7.94e3
  • 7.94e3
59.58
  • 59.58
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
9.14e3
  • 9.14e3
53.42
  • 53.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
39.98
  • 39.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires5 species5 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Theria9 species9 genesCompare expression
Amniota10 species10 genesCompare expression
Euteleostomi11 species12 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000002693.

Cross-references

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