C. porcellus Gene: BRAT1 - ENSCPOG00000002849 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000002849
NameBRAT1
DescriptionBRCA1-associated ATM activator 1 [Source:HGNC Symbol;Acc:HGNC:21701]
OrganismCavia porcellus (guinea pig)
Synonym(s)baat1, c7orf27, mgc22916
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
2.46e3
  • 2.46e3
87.49
  • 87.49
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.92e3
  • 2.92e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.51e3
  • 3.51e3
82.11
  • 82.11
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
5.38e3
  • 5.38e3
72.60
  • 72.60
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
5.66e3
  • 5.66e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
6.06e3
  • 6.06e3
69.14
  • 69.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
6.65e3
  • 6.65e3
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.67e3
  • 6.67e3
66.05
  • 66.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
7.02e3
  • 7.02e3
64.24
  • 64.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
7.35e3
  • 7.35e3
62.54
  • 62.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
7.54e3
  • 7.54e3
61.61
  • 61.61
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000113post-juvenile adult stage
8.23e3
  • 8.23e3
58.08
  • 58.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
50.71
  • 50.71
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0000068embryo stage
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.11e4
46.29
  • 46.29
  • 43.31
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000002849.

Cross-references

EnsemblENSCPOG00000002849 (BRAT1)
HGNCHGNC:21701 (BRAT1)
EMBLAAKN02032208
Uniprot/SPTREMBLH0UZI2, H0UZI2_CAVPO

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