C. porcellus Gene: SPATA9 - ENSCPOG00000003616 - Cavia porcellus (guinea pig)

General information

Ensembl IDENSCPOG00000003616
NameSPATA9
Descriptionspermatogenesis associated 9 [Source:HGNC Symbol;Acc:HGNC:22988]
OrganismCavia porcellus (guinea pig)
Synonym(s)flj35906, nyd-sp16
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
404
  • 404
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
37.16
  • 37.16
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
35.60
  • 35.60
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
33.40
  • 33.40
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
31.64
  • 31.64
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
17.92
  • 17.92
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
12.02
  • 12.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
1.74e4
  • 1.74e4
11.32
  • 11.32
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
8.34
  • 8.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSCPOG00000003616.

Cross-references

EnsemblENSCPOG00000003616 (SPATA9)
HGNCHGNC:22988 (SPATA9)
EMBLAAKN02002374
Uniprot/SPTREMBLH0V1A5, H0V1A5_CAVPO

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